RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 WASHC5Q12768 1159 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 TSTA3Q13630 321 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 GRB14Q14449 540 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 EFTUD2Q15029 972 aaKnown RBP eCLIP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 MTHFSDQ2M296 383 aaKnown RBP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 CCDC92Q53HC0 331 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 XKR3Q5GH77 459 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 C9orf50Q5SZB4 431 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 PRAMEF8Q5VWM4 474 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 SUSD4Q5VX71 490 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 KCTD11Q693B1 232 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 CD164L2Q6UWJ8 174 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 DHRS11Q6UWP2 260 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 ANKRD33Q7Z3H0 272 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 MIER3Q7Z3K6 550 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 TRMT11Q7Z4G4 463 aaKnown RBP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 COX8CQ7Z4L0 72 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 AMER3Q8N944 861 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 ANKRD20A12PQ8NF67 263 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 GGHQ92820 318 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 ZNF524Q96C55 264 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 SENP5Q96HI0 755 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 LRR1Q96L50 414 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 C10orf90Q96M02 699 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 USP28Q96RU2 1077 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 RASL10BQ96S79 203 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 PCDHB18PQ96TA0 734 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 SYT15Q9BQS2 421 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 CLEC7AQ9BXN2 247 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 TEX13AQ9BXU3 409 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 DDX47Q9H0S4 455 aaKnown RBP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 VPS33BQ9H267 617 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 MTHFD2LQ9H903 347 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 ZCCHC3Q9NUD5 404 aaKnown RBP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 PILRBQ9UKJ0 227 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 PLCL2Q9UPR0 1127 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 SATB2Q9UPW6 733 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 MRPS28Q9Y2Q9 187 aaKnown RBP3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 ZHX2Q9Y6X8 837 aa3.1□□□□□ -1.91
CTDSPL2-211ENST00000561189 TRBV2A0A0J9YWF9 115 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 hCG_38984A0A1B0GV85 526 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 ANKDD1BA6NHY2 528 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 TMCO5BA8MYB1 307 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 CHUKO15111 745 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 AKAP3O75969 853 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 MT-ND2P03891 347 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 MT-ND3P03897 115 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 GPIP06744 558 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 UMODP07911 640 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 SFTPBP07988 381 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 TRIM49P0CI25 452 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 TRIM49CP0CI26 452 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 RNF224P0DH78 156 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 DLATP10515 647 aaKnown RBP3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 OR3A1P47881 315 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 OR3A2P47893 321 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 HUNKP57058 714 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 LINC01547P58512 204 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 FKBP1BP68106 108 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 IRX4P78413 519 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 CEACAM7Q14002 265 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 KRT31Q15323 416 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 TAB1Q15750 504 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 SGCBQ16585 318 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 LRRC37A5PQ49AS3 106 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 SLC10A5Q5PT55 438 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 SNRNP48Q6IEG0 339 aaKnown RBP3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 TRIM65Q6PJ69 517 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 SLC25A47Q6Q0C1 308 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 B3GLCTQ6Y288 498 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 PRSS42Q7Z5A4 293 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 CPEB2Q7Z5Q1 589 aaKnown RBP3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 SMIM29Q86T20 159 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 BATF2Q8N1L9 274 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 RTL3Q8N8U3 475 aaKnown RBP3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 SPATA18Q8TC71 538 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 NXPE2Q96DL1 559 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 PDLIM5Q96HC4 596 aaKnown RBP3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 GMPPAQ96IJ6 420 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 GUCD1Q96NT3 240 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 RUFY1Q96T51 708 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 PRMT1Q99873 361 aaKnown RBP3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 DDX50Q9BQ39 737 aaKnown RBP3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 TRIM51Q9BSJ1 452 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 THAP2Q9H0W7 228 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 EGLN3Q9H6Z9 239 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 SP140LQ9H930 580 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 MAGEF1Q9HAY2 307 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 GPN1Q9HCN4 374 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 B3GAT2Q9NPZ5 323 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 MAN2C1Q9NTJ4 1040 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 ATAD3AQ9NVI7 634 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 C2orf42Q9NWW7 574 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 PLEK2Q9NYT0 353 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 POMT2Q9UKY4 750 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 EXOC7Q9UPT5 735 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 PPP2R2CQ9Y2T4 447 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 TMED7Q9Y3B3 224 aa3.09□□□□□ -1.91
CTDSPL2-211ENST00000561189 A0A087WZ39 114 aa3.08□□□□□ -1.92
CTDSPL2-211ENST00000561189 RNF103-CHMP3A0A140T963 221 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms