RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 NIPAL3Q6P499 406 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 FAM122CQ6P4D5 195 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 KCNIP4Q6PIL6 250 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 FAM159AQ6UWV7 190 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 BTNL8Q6UX41 500 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SCARA5Q6ZMJ2 495 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 Q6ZRM9 215 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 LRRC55Q6ZSA7 311 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ZNF534Q76KX8 674 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TRMT10CQ7L0Y3 403 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 SSX9Q7RTT3 188 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TRPM8Q7Z2W7 1104 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 P4HA3Q7Z4N8 544 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 BCDIN3DQ7Z5W3 292 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 TMPRSS11BQ86T26 416 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 BIVMQ86UB2 503 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ZNF761Q86XN6 746 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 ECHDC2Q86YB7 292 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 CCDC50Q8IVM0 306 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TMEM151BQ8IW70 566 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MAP7D3Q8IWC1 876 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 KATNAL2Q8IYT4 538 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MICU2Q8IYU8 434 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 CENPSQ8N2Z9 138 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 GPR137CQ8N3F9 429 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PRSS35Q8N3Z0 413 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ARL14EPQ8N8R7 260 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 AMER3Q8N944 861 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 COLGALT1Q8NBJ5 622 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 DDHD1Q8NEL9 900 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TRPV3Q8NET8 790 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ENGASEQ8NFI3 743 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 GPRC5AQ8NFJ5 357 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 RDM1Q8NG50 284 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 OR8J1Q8NGP2 316 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 OR14A16Q8NHC5 309 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 LILRB4Q8NHJ6 448 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 KCNG3Q8TAE7 436 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 DDI1Q8WTU0 396 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PDCD6IPQ8WUM4 868 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 MITD1Q8WV92 249 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MAIP1Q8WWC4 291 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TRIB2Q92519 343 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SNAPC3Q92966 411 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 P2RX5Q93086 422 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 GLYATL1Q969I3 302 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 KIAA1143Q96AT1 154 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 SGK3Q96BR1 496 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ZNF775Q96BV0 537 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 HAVCR1Q96D42 359 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ZNF274Q96GC6 653 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 SLC41A3Q96GZ6 507 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MSANTD3Q96H12 275 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 AKR1E2Q96JD6 320 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ARL5BQ96KC2 179 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ART5Q96L15 291 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 C12orf66Q96MD2 445 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 CATSPER2Q96P56 530 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 GNRHR2Q96P88 292 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 RAB40CQ96S21 281 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 CCNL2Q96S94 520 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 KCNS3Q9BQ31 491 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 C16orf70Q9BSU1 422 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TRMOQ9BU70 441 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 WRAP53Q9BUR4 548 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 TRAF4Q9BUZ4 470 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 FUNDC2Q9BWH2 189 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TSSK1BQ9BXA7 367 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SLC2A11Q9BYW1 496 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 B3GNT4Q9C0J1 378 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SLC7A5P2Q9GIP4 190 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ROGDIQ9GZN7 287 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 NPFFR1Q9GZQ6 430 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SPRTNQ9H040 489 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 ZMYND12Q9H0C1 365 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 FAM234AQ9H0X4 552 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 RGCCQ9H4X1 137 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SLITRK6Q9H5Y7 841 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 UBTD1Q9HAC8 227 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SEBOXQ9HB31 216 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 DNAJC4Q9NNZ3 241 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 MKKSQ9NPJ1 570 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 PNRC2Q9NPJ4 139 aaKnown RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 SERTAD4Q9NUC0 356 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 KLHL28Q9NXS3 571 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PTTG2Q9NZH5 202 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.93□□□□□ -2.1
RTF1-207ENST00000561076 IFNKQ9P0W0 207 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 CHRNA9Q9UGM1 479 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 LCMT1Q9UIC8 334 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 CRLS1Q9UJA2 301 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ACSL5Q9ULC5 683 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PCDHA12Q9UN75 941 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 ST3GAL5Q9UNP4 418 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 PIGLQ9Y2B2 252 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 IFT52Q9Y366 437 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 TMED3Q9Y3Q3 217 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 WDR45Q9Y484 360 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 YIPF1Q9Y548 306 aa1.93□□□□□ -2.1
RTF1-207ENST00000561076 SPIN1Q9Y657 262 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms