RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 HERC3Q15034 1050 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 TYSND1Q2T9J0 566 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 ZNF470Q6ECI4 717 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 FGD2Q7Z6J4 655 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 PDSS2Q86YH6 399 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 PALM2Q8IXS6 379 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 CLYBLQ8N0X4 340 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 MMP21Q8N119 569 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 CYP4Z2PQ8N1L4 340 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 FBXO15Q8NCQ5 510 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 OR5T3Q8NGG3 340 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 TBC1D20Q96BZ9 403 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 THAP11Q96EK4 314 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 CCDC138Q96M89 665 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 OR1F2PQ96R84 312 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 FRMD8P1Q9BZ68 369 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 TSGA10Q9BZW7 698 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 DEFB127Q9H1M4 99 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 DNAJB12Q9NXW2 375 aaKnown RBP9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 SAMD15Q9P1V8 674 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 FBXW2Q9UKT8 454 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 ERVK-11Q9UQG0 969 aa9.83□□□□□ -0.84
CDC42BPB-207ENST00000560492 TRBV11-1A0A0K0K1C0 115 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 MPC1LP0DKB6 136 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 CDH1P12830 882 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 TFEBP19484 476 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 KLK2P20151 261 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 IL10P22301 178 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 MSX1P28360 303 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 RPL22P35268 128 aaKnown RBP9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 HLCSP50747 726 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 FOLH1Q04609 750 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 CEBPEQ15744 281 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 DEFB134Q4QY38 66 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 NEPROQ6NW34 567 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 ARHGAP11AQ6P4F7 1023 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 PAOXQ6QHF9 649 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 PIWIL4Q7Z3Z4 852 aaKnown RBP9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 SULF2Q8IWU5 870 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 CHERPQ8IWX8 916 aaKnown RBP9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 DMRTC2Q8IXT2 367 aaPredicted RBP9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 CPNE9Q8IYJ1 553 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 TXLNBQ8N3L3 684 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 RPRMLQ8N4K4 120 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 MARVELD2Q8N4S9 558 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 TBC1D19Q8N5T2 526 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 PLPP5Q8NEB5 264 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 ARMC2Q8NEN0 867 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 OR5M9Q8NGP3 310 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 LILRB4Q8NHJ6 448 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 SEC16BQ96JE7 1060 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 PWWP2AQ96N64 755 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 SLC30A3Q99726 388 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 SLC6A16Q9GZN6 736 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 PCBD2Q9H0N5 130 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 ATG10Q9H0Y0 220 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 SLC24A3Q9HC58 644 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 EIF2B3Q9NR50 452 aaKnown RBP9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 FBXO6Q9NRD1 293 aaPredicted RBP9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 LANCL2Q9NS86 450 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 CCM2LQ9NUG4 571 aaPredicted RBP9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 INTS10Q9NVR2 710 aaKnown RBP9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 TNFRSF10DQ9UBN6 386 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 KCNN3Q9UGI6 736 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 REXO2Q9Y3B8 237 aaKnown RBP9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 EML6Q6ZMW3 1958 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 SPG11Q96JI7 2443 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 ZNF407Q9C0G0 2248 aa9.82□□□□□ -0.84
CDC42BPB-207ENST00000560492 DNAJC13O75165 2243 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 KCNE1BA0A087WTH5 132 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 FAM237BA0A1B0GVD1 139 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 SAGE2PA6NJ88 616 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 FAM166BA8MTA8 275 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 GOLGA6L6A8MZA4 724 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 NPIPA2E9PIF3 369 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 NPIPA3F8WFD2 350 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 ACOT7O00154 380 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 GPR37O15354 613 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 SLC16A5O15375 505 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 CHST10O43529 356 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 OR1F1O43749 312 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 LCMT2O60294 686 aaKnown RBP9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 CEP104O60308 925 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 TOXO94900 526 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 B3GALT4O96024 378 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 ENO3P13929 434 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 MAOAP21397 527 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 ARNTP27540 789 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 HNF4AP41235 474 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 CLCN7P51798 805 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 NUP107P57740 925 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 MLF1P58340 268 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 SARNPP82979 210 aaKnown RBP9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 MEF2AQ02078 507 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 RGS1Q08116 209 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 NAE1Q13564 534 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 CMPK2Q5EBM0 449 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 FBXW10Q5XX13 1052 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 KIAA0930Q6ICG6 404 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 ZNF585AQ6P3V2 769 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms