RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 MSANTD1Q6ZTZ1 278 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 IKBIPQ70UQ0 350 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 COMMD6Q7Z4G1 85 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 R3HCC1LQ7Z5L2 792 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 ASPGQ86U10 573 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 TRIM73Q86UV7 250 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 PLD3Q8IV08 490 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 FAM20CQ8IXL6 584 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 RIMKLAQ8IXN7 391 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 C19orf47Q8N9M1 422 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 RBM15BQ8NDT2 890 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 OR2L5Q8NG80 312 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 DNAJB8Q8NHS0 232 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 SLC13A3Q8WWT9 602 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 NAT6Q93015 286 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 RERGQ96A58 199 aaPredicted RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 RCN3Q96D15 328 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 TCTN2Q96GX1 697 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 TMEM74Q96NL1 305 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 KCNC2Q96PR1 638 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 TRAPPC9Q96Q05 1148 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 OR2A5Q96R48 311 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 F2RL3Q96RI0 385 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 PRPF18Q99633 342 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 DPYSL5Q9BPU6 564 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 TBCDQ9BTW9 1192 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 NLNQ9BYT8 704 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 SLC6A16Q9GZN6 736 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 ROGDIQ9GZN7 287 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 REXO4Q9GZR2 422 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 KCNH6Q9H252 994 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 DDX31Q9H8H2 851 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 SLC52A3Q9NQ40 469 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 DNAAF2Q9NVR5 837 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 GID8Q9NWU2 228 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 BAIAP2L1Q9UHR4 511 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 MN1Q10571 1320 aaPredicted RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 A0A088AWK7 358 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 A0A0J9YVX5 310 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 ARHGAP10A1A4S6 786 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 EME2A4GXA9 379 aaPredicted RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 FAM86C2PA6NEL3 165 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 NR5A2O00482 541 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 TRIM38O00635 465 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 FBP2O00757 339 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 MRASO14807 208 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 AIM2O14862 343 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 TOX3O15405 576 aaPredicted RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 CAPN5O15484 640 aaPredicted RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 ZSCAN9O15535 394 aaPredicted RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 SIGLEC6O43699 453 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 CTSVO60911 334 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 GUCY1B2O75343 617 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 SH3BGRLO75368 114 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 ZBTB11O95625 1053 aaPredicted RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 C9P02748 559 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 SERPIND1P05546 499 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 RETP07949 1114 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 NQO1P15559 274 aaKnown RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 ST6GAL1P15907 406 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 ENGP17813 658 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 CAPN3P20807 821 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 ZNF10P21506 573 aaPredicted RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 TACR1P25103 407 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 TPP2P29144 1249 aaPredicted RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 IL12AP29459 219 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 HNRNPH1P31943 449 aaKnown RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 HPCAL1P37235 193 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 CPA2P48052 419 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 LSSP48449 732 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 PPM1FP49593 454 aaPredicted RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 NUDT2P50583 147 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 CORO7P57737 925 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 OR1D5P58170 312 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 CYP4F2P78329 520 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 HEPACAMQ14CZ8 416 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 CLPPQ16740 277 aaPredicted RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 CCNYL2Q5T2Q4 361 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 REP15Q6BDI9 236 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 DBX2Q6ZNG2 339 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 VN1R4Q7Z5H5 301 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 CAMKMTQ7Z624 323 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 SPRED1Q7Z699 444 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 GPR180Q86V85 440 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 KMT5CQ86Y97 462 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 GATAD2AQ86YP4 633 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 TMEM132CQ8N3T6 1108 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 MINDY1Q8N5J2 469 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 DPP10Q8N608 796 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 NATD1Q8N6N6 113 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 OR8J2Q8NGG1 315 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 WDR48Q8TAF3 677 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 NCSTNQ92542 709 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 GAL3ST3Q96A11 431 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 MCUR1Q96AQ8 359 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 MS4A6EQ96DS6 147 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 TEX37Q96LM6 180 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 TSSK3Q96PN8 268 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 HOPXQ9BPY8 73 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms