RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 JMJD6Q6NYC1 403 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-213ENST00000560175 METTL2BQ6P1Q9 378 aaKnown RBP12.48□□□□□ -0.41
SMAD3-213ENST00000560175 LRRC70Q7Z2Q7 622 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 VN1R5Q7Z5H4 357 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 Q8NA96 180 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 DCAKDQ8WVC6 231 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 KCTD4Q8WVF5 259 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 VN1R1Q9GZP7 353 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 LHPPQ9H008 270 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 KLHL31Q9H511 634 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 WWOXQ9NZC7 414 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 MKL2Q9ULH7 1088 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 NFU1Q9UMS0 254 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 FLNCQ14315 2725 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 CPAMD8Q8IZJ3 1885 aa12.48□□□□□ -0.41
SMAD3-213ENST00000560175 A0A087WUV0 522 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-213ENST00000560175 LRIT2A6NDA9 550 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 URADA6NGE7 173 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 C4orf51C9J302 202 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 DNAJB6O75190 326 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 RDH16O75452 317 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 CLEC3AO75596 197 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 ALPPP05187 535 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 COL6A2P12110 1019 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 GCAP28676 217 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 TYK2P29597 1187 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 XCR1P46094 333 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 SERPINB8P50452 374 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 SKP1P63208 163 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 IRF9Q00978 393 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 RHAGQ02094 409 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 DOC2AQ14183 400 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 SLBPQ14493 270 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMAD3-213ENST00000560175 NAA30Q147X3 362 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-213ENST00000560175 PCOLCEQ15113 449 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 PDK4Q16654 411 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 FBXO48Q5FWF7 155 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 CRB2Q5IJ48 1285 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 RIPOR1Q6ZS17 1223 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 Q6ZS92 163 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 TRMT10CQ7L0Y3 403 aaKnown RBP12.47□□□□□ -0.41
SMAD3-213ENST00000560175 ABHD13Q7L211 337 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 PRSS58Q8IYP2 241 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 KRT78Q8N1N4 520 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 PLD6Q8N2A8 252 aaKnown RBP12.47□□□□□ -0.41
SMAD3-213ENST00000560175 ZCCHC10Q8TBK6 192 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 PNPLA2Q96AD5 504 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 MIB2Q96AX9 1013 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 C8orf44Q96CB5 159 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 MS4A6EQ96DS6 147 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 PTCD3Q96EY7 689 aaKnown RBP12.47□□□□□ -0.41
SMAD3-213ENST00000560175 LMF1Q96S06 567 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 PAFAH2Q99487 392 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 EFCAB11Q9BUY7 163 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 YIPF2Q9BWQ6 316 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 ZBTB20Q9HC78 741 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-213ENST00000560175 FETUBQ9UGM5 382 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 TSC22D4Q9Y3Q8 395 aa12.47□□□□□ -0.41
SMAD3-213ENST00000560175 SYCE1LA8MT33 242 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 K7EPI3 171 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 UBXN8O00124 270 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 CLGNO14967 610 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 CHST10O43529 356 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 SERPINA7P05543 415 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 INHBAP08476 426 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 ZNF888P0CJ79 500 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-213ENST00000560175 C8orf89P0DMQ9 161 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 ICAM2P13598 275 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 ITGA3P26006 1051 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 SOX11P35716 441 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 AGTR2P50052 363 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 LAPTM5Q13571 262 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 SETDB1Q15047 1291 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 RBBP5Q15291 538 aaKnown RBP12.46□□□□□ -0.41
SMAD3-213ENST00000560175 PCBP2Q15366 365 aaKnown RBP eCLIP12.46□□□□□ -0.417e-7■■■■□ 23.3
SMAD3-213ENST00000560175 DEFB134Q4QY38 66 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 SLC6A19Q695T7 634 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 ADGRD1Q6QNK2 874 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 TIFABQ6ZNK6 161 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 PARP9Q8IXQ6 854 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.46□□□□□ -0.41
SMAD3-213ENST00000560175 LAS2Q8IYD9 372 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 TMEM151AQ8N4L1 468 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 LRRN4CLQ8ND94 238 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 OR5T3Q8NGG3 340 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 MRRFQ96E11 262 aaKnown RBP12.46□□□□□ -0.41
SMAD3-213ENST00000560175 QRFPRQ96P65 431 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 WDR77Q9BQA1 342 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-213ENST00000560175 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-213ENST00000560175 EPB41L4BQ9H329 900 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 ZNF160Q9HCG1 818 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 HCN3Q9P1Z3 774 aa12.46□□□□□ -0.41
SMAD3-213ENST00000560175 RP1L1Q8IWN7 2480 aaPredicted RBP12.46□□□□□ -0.42
SMAD3-213ENST00000560175 NSG1A0A0A6YYJ2 146 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 MAGEB17A8MXT2 336 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 RIPK2O43353 540 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 KRT38O76015 456 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 B3GALT4O96024 378 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 FHP07954 510 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 FAM153BP0C7A2 387 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms