RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 KLHDC8AQ8IYD2 350 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 NFKBIDQ8NI38 313 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 POP5Q969H6 163 aaKnown RBP9.65□□□□□ -0.86
LRRC28-216ENST00000559819 LRRC3BQ96PB8 259 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 VPS35Q96QK1 796 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 FAM83CQ9BQN1 747 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 AMBNQ9NP70 447 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 ACOT13Q9NPJ3 140 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 ADPRHL2Q9NX46 363 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 RNF6Q9Y252 685 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 PRKAB1Q9Y478 270 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 MAP4K5Q9Y4K4 846 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 PCDHGA6Q9Y5G7 932 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 PMF1-BGLAPU3KQ54 211 aa9.65□□□□□ -0.86
LRRC28-216ENST00000559819 J3KTA2 159 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 M0R129 80 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 TNFRSF11BO00300 401 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 ACVR2AP27037 513 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 MVKQ03426 396 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF33BQ06732 778 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 LRRC26Q2I0M4 334 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF658BQ4V348 819 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 ARHGAP15Q53QZ3 475 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 ANXA8L1Q5VT79 327 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 ERAP2Q6P179 960 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 SPRED2Q7Z698 418 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 VPS37AQ8NEZ2 397 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 EPYCQ99645 322 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 SLC35A5Q9BS91 424 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 DOHHQ9BU89 302 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 REEP4Q9H6H4 257 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 TBCCD1Q9NVR7 557 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 NDUFAF4Q9P032 175 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 PNMA8BQ9ULN7 279 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 ERGIC3Q9Y282 383 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 PCYT1BQ9Y5K3 369 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 LYVE1Q9Y5Y7 322 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 HSPE1-MOB4S4R3N1 261 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 PIPSLA2A3N6 862 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 SULT1C4O75897 302 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 NADKO95544 446 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 PTPN2P17706 415 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 C2orf80Q0P641 193 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 SYT6Q5T7P8 510 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 EGFLAMQ63HQ2 1017 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 TRMT11Q7Z4G4 463 aaKnown RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 CAMKMTQ7Z624 323 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 GRASPQ7Z6J2 395 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 TSPYL5Q86VY4 417 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 P2RY8Q86VZ1 359 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 SLC5A8Q8N695 610 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 C11orf65Q8NCR3 313 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 STARD8Q92502 1023 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 PROX1Q92786 737 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 NXPE3Q969Y0 559 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 TAMM41Q96BW9 452 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF300Q96RE9 604 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 FEVQ99581 238 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 PITX2Q99697 317 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 DMRT3Q9NQL9 472 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 NFKBIL1Q9UBC1 381 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF282Q9UDV7 671 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-216ENST00000559819 DYRK1BQ9Y463 629 aa9.64□□□□□ -0.87
LRRC28-216ENST00000559819 ANTXRLA6NF34 631 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 M0R3G1 203 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 QSOX1O00391 747 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 RNASET2O00584 256 aaKnown RBP9.63□□□□□ -0.87
LRRC28-216ENST00000559819 LILRB5O75023 590 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 KLK1P06870 262 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 EPCAMP16422 314 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF12P17014 697 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 CEBPBP17676 345 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 IRS1P35568 1242 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 SOAT1P35610 550 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 NUDT6P53370 316 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 CDH12P55289 794 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 TAS2R50P59544 299 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 CXCR4P61073 352 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 SPIBQ01892 262 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 OCA2Q04671 838 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF763Q0D2J5 394 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 SCARB2Q14108 478 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 EXOC3L2Q2M3D2 409 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 PRSS36Q5K4E3 855 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 PERM1Q5SV97 790 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 RAET1GQ6H3X3 334 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 RNF130Q86XS8 419 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 C16orf78Q8WTQ4 265 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 CHPT1Q8WUD6 406 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 ARRDC3Q96B67 414 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 DTD2Q96FN9 168 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 NIPSNAP1Q9BPW8 284 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 BTBD2Q9BX70 525 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 ZDHHC4Q9NPG8 344 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 SPASTQ9UBP0 616 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 ATP6V1HQ9UI12 483 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 SLC6A14Q9UN76 642 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 PTPRSQ13332 1948 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 MYO7AQ13402 2215 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 FUOMA2VDF0 154 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms