RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 CLCQ05315 142 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 DSG2Q14126 1118 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 ERV3-1Q14264 604 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CASP8Q14790 479 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 NKG7Q16617 165 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 TOR1AIP1Q5JTV8 583 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 ATP1A1-AS1Q5TC04 95 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 MYLK4Q86YV6 388 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CCDC63Q8NA47 563 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 ARMC2Q8NEN0 867 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 RDH11Q8TC12 318 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 TCP10LQ8TDR4 215 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 TRPC4APQ8TEL6 797 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 ZNF473Q8WTR7 871 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CCT6BQ92526 530 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 UBE2E3Q969T4 207 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CCDC126Q96EE4 140 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 PGM2Q96G03 612 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 SLC26A1Q9H2B4 701 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 ANKHQ9HCJ1 492 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 SENP1Q9P0U3 644 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 CTSFQ9UBX1 484 aa19.25■□□□□ 0.67
TSPAN3-207ENST00000559494 LRIT2A6NDA9 550 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 VSTM2BA6NLU5 285 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 C4orf51C9J302 202 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 H0YIG0 161 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 SGK494L7N484 410 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 FFAR3O14843 346 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 GPR42O15529 346 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 DNAJB6O75190 326 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 RECKO95980 971 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 ZNF888P0CJ79 500 aaPredicted RBP19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 PRKAR1AP10644 381 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 PCNAP12004 261 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 H2AFXP16104 143 aaPredicted RBP19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 ALOX12P18054 663 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 HNRNPH1P31943 449 aaKnown RBP19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 AVPR1BP47901 424 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 RAB8AP61006 207 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 MAT1AQ00266 395 aaKnown RBP19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 HERC3Q15034 1050 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 CPSF6Q16630 551 aaKnown RBP eCLIP19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 SYT16Q17RD7 645 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 CRTC2Q53ET0 693 aaPredicted RBP19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 MILR1Q7Z6M3 343 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 SYVN1Q86TM6 617 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 OR4F6Q8NGB9 312 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 PPP4R1Q8TF05 950 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 FAM111AQ96PZ2 611 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 IQCGQ9H095 443 aaKnown RBP19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 OXSMQ9NWU1 459 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 ZNF225Q9UK10 706 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 PTRH2Q9Y3E5 179 aaKnown RBP19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 NAALAD2Q9Y3Q0 740 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 PCDHGA11Q9Y5H2 935 aa19.24■□□□□ 0.67
TSPAN3-207ENST00000559494 IGLV3-12A0A075B6K2 115 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 URADA6NGE7 173 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 H0YIV9 168 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 GALR3O60755 368 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 KLHL18O94889 574 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 CD63P08962 238 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 DNAJB13P59910 316 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 MC1RQ01726 317 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 IL10RAQ13651 578 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 ZRSR2Q15696 482 aaKnown RBP19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 RBBP7Q16576 425 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 ADPRMQ3LIE5 342 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 DEFB134Q4QY38 66 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 VWA2Q5GFL6 755 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 GPR155Q7Z3F1 870 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 C10orf107Q8IVU9 208 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 RNF175Q8N4F7 328 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 CCNYL1Q8N7R7 359 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 STT3BQ8TCJ2 826 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 MS4A6EQ96DS6 147 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 F2RL3Q96RI0 385 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 SPSB2Q99619 263 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 YIPF2Q9BWQ6 316 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 GSTO2Q9H4Y5 243 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 TRPC4Q9UBN4 977 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 ZNF282Q9UDV7 671 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 TSC22D4Q9Y3Q8 395 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 MAP4K5Q9Y4K4 846 aa19.23■□□□□ 0.67
TSPAN3-207ENST00000559494 SCN2AQ99250 2005 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 NBEAQ8NFP9 2946 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 PRPF4O43172 522 aaKnown RBP eCLIP19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 OTCP00480 354 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 ARL1P40616 181 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 NAGLUP54802 743 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 STXBP1P61764 594 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 CDC20Q12834 499 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 PCLAFQ15004 111 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 FAM219BQ5XKK7 198 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 LETMD1Q6P1Q0 360 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 ABHD13Q7L211 337 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 LAPTM4BQ86VI4 370 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 OR2Y1Q8NGV0 311 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 HUS1BQ8NHY5 278 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 WDR20Q8TBZ3 569 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 MS4A8Q9BY19 250 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms