RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 FBXO36Q8NEA4 188 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 PLPP5Q8NEB5 264 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 CREB3L4Q8TEY5 395 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 ITLN2Q8WWU7 325 aaPredicted RBP12.73□□□□□ -0.37
VPS18-203ENST00000558855 SLC5A11Q8WWX8 675 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 METTL21AQ8WXB1 218 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 SMIM10Q96HG1 83 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 HAUS8Q9BT25 410 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 SLC6A16Q9GZN6 736 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 CAB39LQ9H9S4 337 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 KCNK13Q9HB14 408 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 NECTIN3Q9NQS3 549 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 KLHL1Q9NR64 748 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 ABI3Q9P2A4 366 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 SH3BGRL2Q9UJC5 107 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 SLC22A14Q9Y267 594 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 CLDN16Q9Y5I7 305 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 CSMD2Q7Z408 3487 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 GTF3C1Q12789 2109 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 A0A0G2JN53 185 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 MAGEB17A8MXT2 336 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 E7ESA3 106 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 ZSCAN12O43309 604 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 NEURL1O76050 574 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 RASAL1O95294 804 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 C1QAP02745 245 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 FHP07954 510 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 TCP1P17987 556 aaKnown RBP12.72□□□□□ -0.37
VPS18-203ENST00000558855 ALOX12P18054 663 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 CCND1P24385 295 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 HNRNPFP52597 415 aaKnown RBP12.72□□□□□ -0.37
VPS18-203ENST00000558855 AP1S2P56377 157 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 PDIA2Q13087 525 aaKnown RBP12.72□□□□□ -0.37
VPS18-203ENST00000558855 TSNQ15631 228 aaKnown RBP12.72□□□□□ -0.37
VPS18-203ENST00000558855 NSDHLQ15738 373 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 INAQ16352 499 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 ZNF766Q5HY98 468 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 SPINK14Q6IE38 97 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 VN1R5Q7Z5H4 357 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 STRA8Q7Z7C7 330 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 CHERPQ8IWX8 916 aaKnown RBP12.72□□□□□ -0.37
VPS18-203ENST00000558855 PALM2Q8IXS6 379 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.72□□□□□ -0.37
VPS18-203ENST00000558855 PDIK1LQ8N165 341 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 NFAM1Q8NET5 270 aaPredicted RBP12.72□□□□□ -0.37
VPS18-203ENST00000558855 RELTQ969Z4 430 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 CCDC120Q96HB5 630 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 PDLIM5Q96HC4 596 aaKnown RBP12.72□□□□□ -0.37
VPS18-203ENST00000558855 TMEM79Q9BSE2 394 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 NAT9Q9BTE0 207 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 MMP25Q9NPA2 562 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 MOCS1Q9NZB8 636 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 ZFP69BQ9UJL9 534 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 SNX24Q9Y343 169 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 PCNX1Q96RV3 2341 aa12.72□□□□□ -0.37
VPS18-203ENST00000558855 IGKV3D-11A0A0A0MRZ8 115 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 GABRR3A8MPY1 467 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 A8MUA0 341 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 B4GALT2O60909 372 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 CYC1P08574 325 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 HIST1H2AGP0C0S8 130 aaPredicted RBP12.71□□□□□ -0.37
VPS18-203ENST00000558855 HIST1H2ADP20671 130 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 PPP2R1BP30154 601 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 HNRNPH1P31943 449 aaKnown RBP12.71□□□□□ -0.37
VPS18-203ENST00000558855 SLC6A12P48065 614 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 AGTR2P50052 363 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 NR0B1P51843 470 aaKnown RBP12.71□□□□□ -0.37
VPS18-203ENST00000558855 OR4D2P58180 307 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 GNG11P61952 73 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 MGAT5Q09328 741 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 PWP1Q13610 501 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 OR1C1Q15619 314 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 TOR1AIP1Q5JTV8 583 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 RNFT1Q5M7Z0 435 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 NXPE4Q6UWF7 544 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 CA13Q8N1Q1 262 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 M1APQ8TC57 530 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 ELP5Q8TE02 316 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 ESAMQ96AP7 390 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 TBC1D20Q96BZ9 403 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 SCMH1Q96GD3 660 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 HIST1H2AHQ96KK5 128 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 FRMD6Q96NE9 622 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 OR1F2PQ96R84 312 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 HIST1H2AJQ99878 128 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 H2AFJQ9BTM1 129 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 ZFATQ9P243 1243 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 C19orf25Q9UFG5 118 aaPredicted RBP12.71□□□□□ -0.37
VPS18-203ENST00000558855 ZNF223Q9UK11 482 aaPredicted RBP12.71□□□□□ -0.37
VPS18-203ENST00000558855 CORO1CQ9ULV4 474 aaPredicted RBP12.71□□□□□ -0.37
VPS18-203ENST00000558855 MTO1Q9Y2Z2 717 aaKnown RBP12.71□□□□□ -0.37
VPS18-203ENST00000558855 ASB1Q9Y576 335 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 CACNA1CQ13936 2221 aa12.71□□□□□ -0.37
VPS18-203ENST00000558855 MYO9AB2RTY4 2548 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 ARHGAP10A1A4S6 786 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 TAPBPO15533 448 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 ENO2P09104 434 aaPredicted RBP12.7□□□□□ -0.38
VPS18-203ENST00000558855 ICAM2P13598 275 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 TPP2P29144 1249 aaPredicted RBP12.7□□□□□ -0.38
VPS18-203ENST00000558855 SSTR1P30872 391 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms