RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ERLIN1O75477 346 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 CLEC3AO75596 197 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 RPS17P08708 135 aaKnown RBP11.71□□□□□ -0.53
SMAD3-205ENST00000558428 PCNAP12004 261 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 ALOX12P18054 663 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 ATP5F1P24539 256 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-205ENST00000558428 CRHR1P34998 444 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 CCR10P46092 362 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 CCNG1P51959 295 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 RAB8AP61006 207 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 STXBP1P61764 594 aaKnown RBP11.71□□□□□ -0.53
SMAD3-205ENST00000558428 SKP1P63208 163 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 KLC1Q07866 573 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 HYAL2Q12891 473 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 LINC00303Q3SY05 128 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 DEFB134Q4QY38 66 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 LIPJQ5W064 366 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 ADNP2Q6IQ32 1131 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 NIPAL1Q6NVV3 410 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 MED27Q6P2C8 311 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 PDSS2Q86YH6 399 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 TMEM151BQ8IW70 566 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 AFAP1L2Q8N4X5 818 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 UTP15Q8TED0 518 aaKnown RBP11.71□□□□□ -0.53
SMAD3-205ENST00000558428 APOBEC4Q8WW27 367 aaKnown RBP11.71□□□□□ -0.53
SMAD3-205ENST00000558428 NSUN5Q96P11 429 aaKnown RBP11.71□□□□□ -0.53
SMAD3-205ENST00000558428 CRB3Q9BUF7 120 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 RHBGQ9H310 441 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 SEMA4BQ9NPR2 832 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-205ENST00000558428 C14orf105Q9NVL8 296 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 HCN3Q9P1Z3 774 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 LGALS13Q9UHV8 139 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 EMCNQ9ULC0 261 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 GRID1Q9ULK0 1009 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 NUP210LQ5VU65 1888 aa11.71□□□□□ -0.53
SMAD3-205ENST00000558428 ARGFXA6NJG6 315 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 DLX3O60479 287 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 UGDHO60701 494 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 GALR3O60755 368 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-205ENST00000558428 B3GALT4O96024 378 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 MMP11P24347 488 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 HNRNPH1P31943 449 aaKnown RBP11.7□□□□□ -0.54
SMAD3-205ENST00000558428 HPDP32754 393 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-205ENST00000558428 SLC18A2Q05940 514 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 ATP1A4Q13733 1029 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 DDX39BQ13838 428 aaKnown RBP11.7□□□□□ -0.54
SMAD3-205ENST00000558428 RBBP7Q16576 425 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 KRT71Q3SY84 523 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 CCDC153Q494R4 210 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 RPS27LQ71UM5 84 aaKnown RBP11.7□□□□□ -0.54
SMAD3-205ENST00000558428 VN1R5Q7Z5H4 357 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 MRGPREQ86SM8 312 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 TRABD2AQ86V40 505 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 SLC22A9Q8IVM8 553 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 SRRM1Q8IYB3 904 aaKnown RBP11.7□□□□□ -0.54
SMAD3-205ENST00000558428 LAS2Q8IYD9 372 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 CCDC63Q8NA47 563 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 OR7G3Q8NG95 312 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 OR52B6Q8NGF0 335 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 OR51Q1Q8NH59 317 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 PPP4R1Q8TF05 950 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 ZNF483Q8TF39 744 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-205ENST00000558428 GAL3ST3Q96A11 431 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 FAR2Q96K12 515 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 IP6K3Q96PC2 410 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 CDK15Q96Q40 435 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 TMEM109Q9BVC6 243 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 REXO4Q9GZR2 422 aaKnown RBP11.7□□□□□ -0.54
SMAD3-205ENST00000558428 AICDAQ9GZX7 198 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 ZBTB26Q9HCK0 441 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 SEMA3GQ9NS98 782 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 RNF11Q9Y3C5 154 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 PCDHGA11Q9Y5H2 935 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 KCNMB2Q9Y691 235 aa11.7□□□□□ -0.54
SMAD3-205ENST00000558428 A0A0G2JN53 185 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 LRIT2A6NDA9 550 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 C4orf51C9J302 202 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 PEX12O00623 359 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 OR7A17O14581 309 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 ATXN7O15265 892 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-205ENST00000558428 ERI3O43414 337 aaKnown RBP11.69□□□□□ -0.54
SMAD3-205ENST00000558428 PLIN3O60664 434 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 SUPT7LO94864 414 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 BMP10O95393 424 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 CLDN9O95484 217 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 TBX6O95947 436 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-205ENST00000558428 IGHEP01854 428 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 PROCP04070 461 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 HEXBP07686 556 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 FAM87AP0C7U9 286 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 SMIM10L1P0DMW3 83 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 MYL2P10916 166 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 TSPAN8P19075 237 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 SERPINB1P30740 379 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 XCR1P46094 333 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 PLA2G16P53816 162 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 PRKAA2P54646 552 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 CDH13P55290 713 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 POLE2P56282 527 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 HERVK_113P63132 956 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms