RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 URADA6NGE7 173 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 EFCAB8A8MWE9 144 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 ZG16O60844 167 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 PAFAH1B1P43034 410 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 TAS2R50P59544 299 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 OLR1P78380 273 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 CDKL1Q00532 357 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 ACTN3Q08043 901 aaPredicted RBP13.33□□□□□ -0.28
SNX6-210ENST00000557341 ZNF460Q14592 562 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 USP10Q14694 798 aaKnown RBP13.33□□□□□ -0.28
SNX6-210ENST00000557341 FASTKD3Q14CZ7 662 aaKnown RBP13.33□□□□□ -0.28
SNX6-210ENST00000557341 ZRSR2Q15696 482 aaKnown RBP13.33□□□□□ -0.28
SNX6-210ENST00000557341 ZNF766Q5HY98 468 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 C1QL3Q5VWW1 255 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 TMEM207Q6UWW9 146 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 ADAMTSL2Q86TH1 951 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 THOC6Q86W42 341 aaKnown RBP13.33□□□□□ -0.28
SNX6-210ENST00000557341 CRLF3Q8IUI8 442 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 SLC5A8Q8N695 610 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 TSLPQ969D9 159 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 EGFL8Q99944 293 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 NSMCE4AQ9NXX6 385 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 SEC14L3Q9UDX4 400 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 OARD1Q9Y530 152 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 PCDHGB6Q9Y5F9 930 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 KCNE2Q9Y6J6 123 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 E7ESA3 106 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 CDC7O00311 574 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 TP73O15350 636 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 CHST10O43529 356 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 UNC5CO95185 931 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 HNMTP50135 292 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 OR4D2P58180 307 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 SLC26A5P58743 744 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 TAS2R39P59534 338 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 PMP22Q01453 160 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 ILF2Q12905 390 aaKnown RBP13.32□□□□□ -0.28
SNX6-210ENST00000557341 QSOX2Q6ZRP7 698 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 ZBED8Q8IZ13 594 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 LGI4Q8N135 537 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 ANKRD53Q8N9V6 530 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 TRPV3Q8NET8 790 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 UTP15Q8TED0 518 aaKnown RBP13.32□□□□□ -0.28
SNX6-210ENST00000557341 VPS39Q96JC1 886 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 UTP23Q9BRU9 249 aaKnown RBP13.32□□□□□ -0.28
SNX6-210ENST00000557341 SLC6A16Q9GZN6 736 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 RHOJQ9H4E5 214 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 POPDC3Q9HBV1 291 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 MOCS1Q9NZB8 636 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 SLC22A14Q9Y267 594 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 CACNA1CQ13936 2221 aa13.32□□□□□ -0.28
SNX6-210ENST00000557341 PSMD12O00232 456 aaPredicted RBP13.31□□□□□ -0.28
SNX6-210ENST00000557341 WDR47O94967 919 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 B3GALT4O96024 378 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 MST1P26927 711 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 RPL21P46778 160 aaKnown RBP13.31□□□□□ -0.28
SNX6-210ENST00000557341 SLC12A2P55011 1212 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 RAB8AP61006 207 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 RBPJQ06330 500 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 TUBA3CQ13748 450 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 TUBA3EQ6PEY2 450 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 NXPE4Q6UWF7 544 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 SLC34A3Q8N130 599 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 TMEM178AQ8NBL3 297 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 BBOF1Q8ND07 529 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 MDS2Q8NDY4 140 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 RELTQ969Z4 430 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 SIGLEC12Q96PQ1 595 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 NPAS2Q99743 824 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 CLK4Q9HAZ1 481 aaKnown RBP13.31□□□□□ -0.28
SNX6-210ENST00000557341 GPAMQ9HCL2 828 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 ANKRD10Q9NXR5 420 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 RNF14Q9UBS8 474 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 SUCOQ9UBS9 1254 aaKnown RBP13.31□□□□□ -0.28
SNX6-210ENST00000557341 CTNNAL1Q9UBT7 734 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 PCNX1Q96RV3 2341 aa13.31□□□□□ -0.28
SNX6-210ENST00000557341 ABCA12Q86UK0 2595 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 APCP25054 2843 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 GABRR3A8MPY1 467 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 PRMT3O60678 531 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 B4GALT2O60909 372 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 MLYCDO95822 493 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 RNH1P13489 461 aaKnown RBP13.3□□□□□ -0.28
SNX6-210ENST00000557341 CD46P15529 392 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 GNAZP19086 355 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 EEF1DP29692 281 aaKnown RBP13.3□□□□□ -0.28
SNX6-210ENST00000557341 HNF4AP41235 474 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 STXBP1P61764 594 aaKnown RBP13.3□□□□□ -0.28
SNX6-210ENST00000557341 OC90Q02509 493 aaPredicted RBP13.3□□□□□ -0.28
SNX6-210ENST00000557341 HYAL2Q12891 473 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 RBBP5Q15291 538 aaKnown RBP13.3□□□□□ -0.28
SNX6-210ENST00000557341 OR1C1Q15619 314 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 TSNQ15631 228 aaKnown RBP13.3□□□□□ -0.28
SNX6-210ENST00000557341 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.3□□□□□ -0.285e-10■■■□□ 15
SNX6-210ENST00000557341 TOR1AIP1Q5JTV8 583 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 CAPN12Q6ZSI9 719 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 LURAP1LQ8IV03 231 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 CEP97Q8IW35 865 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 HORMAD2Q8N7B1 307 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 FAM98AQ8NCA5 519 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms