RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 CHTF18Q8WVB6 975 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 TWIST2Q8WVJ9 160 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SKA2Q8WVK7 121 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 GAB3Q8WWW8 586 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 ATL1Q8WXF7 558 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SCAMP4Q969E2 229 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 GLYATL1Q969I3 302 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 ROPN1LQ96C74 230 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 RHBDF1Q96CC6 855 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 TUBGCP3Q96CW5 907 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 ZFYVE19Q96K21 471 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 PPP1R36Q96LQ0 422 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CCDC138Q96M89 665 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 NECTIN4Q96NY8 510 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CATSPER2Q96P56 530 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CDRT15Q96T59 188 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 EGFL8Q99944 293 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 HOPXQ9BPY8 73 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 CCM2Q9BSQ5 444 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SLC29A3Q9BZD2 475 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 ABCG8Q9H221 673 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 S1PR5Q9H228 398 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 NOL11Q9H8H0 719 aaKnown RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 RNPEPL1Q9HAU8 725 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 HPS4Q9NQG7 708 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SDR39U1Q9NRG7 319 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 ARL15Q9NXU5 204 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 OPTCQ9UBM4 332 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SLC7A8Q9UHI5 535 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 POLG2Q9UHN1 485 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 IKZF3Q9UKT9 509 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 TMPRSS11EQ9UL52 423 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 NDUFAF1Q9Y375 327 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 FIS1Q9Y3D6 152 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 PDCD11Q14690 1871 aaKnown RBP4.31□□□□□ -1.72
SRP54-212ENST00000556992 FRMPD3Q5JV73 1810 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 C17orf113A0A1B0GUU1 675 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 ATP6AP2A0A1C7CYW4 349 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 A0A1W2PR48 441 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 KLHL33A6NCF5 533 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 LRRC14BA6NHZ5 514 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 BBIP1A8MTZ0 92 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 K7EPI3 171 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 OR7A17O14581 309 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 LIN7AO14910 233 aaPredicted RBP4.31□□□□□ -1.72
SRP54-212ENST00000556992 CFLARO15519 480 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 TAPBPO15533 448 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 GPR39O43194 453 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 RGS14O43566 566 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 AP1G1O43747 822 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 VEGFDO43915 354 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 NRP2O60462 931 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 PEX11AO75192 247 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 SKAP2O75563 359 aaPredicted RBP4.31□□□□□ -1.72
SRP54-212ENST00000556992 SLC22A3O75751 556 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 ATP6AP2O75787 350 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 RECQL5O94762 991 aaPredicted RBP4.31□□□□□ -1.72
SRP54-212ENST00000556992 WDR47O94967 919 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 PSMG1O95456 288 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 CLDN9O95484 217 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 ANP32DO95626 131 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 GUCA1CO95843 209 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 IGLV2-14P01704 120 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 KRT6AP02538 564 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 KRT6BP04259 564 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 CAPN1P07384 714 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 CLEC2LP0C7M8 214 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 ADRB3P13945 408 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 ITGAXP20702 1163 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 C5AR1P21730 350 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 GPX3P22352 226 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 ME2P23368 584 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 HMOX2P30519 316 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 GDI1P31150 447 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 CA5AP35218 305 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 ARL1P40616 181 aaPredicted RBP4.31□□□□□ -1.72
SRP54-212ENST00000556992 OPRD1P41143 372 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 GPR1P46091 355 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 KRT6CP48668 564 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 AGTR2P50052 363 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 NUDT2P50583 147 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 CHN2P52757 468 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 MTTPP55157 894 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 ERVPABLB-1P60509 514 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 PSME3P61289 254 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 AP2B1P63010 937 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 EMX2Q04743 252 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 ZNF33BQ06732 778 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 TBL3Q12788 808 aaKnown RBP4.31□□□□□ -1.72
SRP54-212ENST00000556992 RALGDSQ12967 914 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 ABRQ12979 859 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 MAD2L1Q13257 205 aaPredicted RBP4.31□□□□□ -1.72
SRP54-212ENST00000556992 GTF2H3Q13889 308 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 PTK2BQ14289 1009 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 GBX1Q14549 363 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 KPNB1Q14974 876 aaKnown RBP4.31□□□□□ -1.72
SRP54-212ENST00000556992 PHKG1Q16816 387 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 KIF19Q2TAC6 998 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 MMEL1Q495T6 779 aa4.31□□□□□ -1.72
SRP54-212ENST00000556992 BCL7AQ4VC05 210 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms