RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHD8-211ENST00000556833 TBC1D20Q96BZ9 403 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 SDCCAG3Q96C92 435 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 PTCHD1Q96NR3 888 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 FAM167BQ9BTA0 163 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 PCBD2Q9H0N5 130 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 XAB2Q9HCS7 855 aaKnown RBP13.86□□□□□ -0.19
CHD8-211ENST00000556833 ARL15Q9NXU5 204 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 KLHL42Q9P2K6 505 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 PPT2Q9UMR5 302 aa13.86□□□□□ -0.19
CHD8-211ENST00000556833 INTS1Q8N201 2190 aaKnown RBP13.86□□□□□ -0.19
CHD8-211ENST00000556833 EML6Q6ZMW3 1958 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 ZNF407Q9C0G0 2248 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 GALR3O60755 368 aaPredicted RBP13.85□□□□□ -0.19
CHD8-211ENST00000556833 MLYCDO95822 493 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 TPOP07202 933 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 C8GP07360 202 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 MLNP12872 115 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 NPPBP16860 134 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 ALOX12P18054 663 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 MEOX1P50221 254 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 CCR8P51685 355 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 NR0B1P51843 470 aaKnown RBP13.85□□□□□ -0.19
CHD8-211ENST00000556833 GPR85P60893 370 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 HERC3Q15034 1050 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 KRTCAP3Q53RY4 240 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 HP1BP3Q5SSJ5 553 aaPredicted RBP13.85□□□□□ -0.19
CHD8-211ENST00000556833 MEX3BQ6ZN04 569 aaKnown RBP13.85□□□□□ -0.19
CHD8-211ENST00000556833 CEP128Q6ZU80 1094 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 CHERPQ8IWX8 916 aaKnown RBP13.85□□□□□ -0.19
CHD8-211ENST00000556833 GHDCQ8N2G8 530 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 PLPP5Q8NEB5 264 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 CALML6Q8TD86 181 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 SIGLEC10Q96LC7 697 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 OR4K3Q96R72 315 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 SGPP1Q9BX95 441 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 HOMER3Q9NSC5 361 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 COMMD10Q9Y6G5 202 aa13.85□□□□□ -0.19
CHD8-211ENST00000556833 A0A0G2JN53 185 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 MAGEB16A2A368 324 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 PABPN1LA6NDY0 278 aaKnown RBP13.84□□□□□ -0.19
CHD8-211ENST00000556833 FAM90A27PA6NNH2 459 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 C4orf51C9J302 202 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 TFECO14948 347 aaPredicted RBP13.84□□□□□ -0.19
CHD8-211ENST00000556833 NME2P1O60361 137 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 PDE9AO76083 593 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 TSPAN12O95859 305 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 CYC1P08574 325 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 CCDC175P0C221 793 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 NME2P22392 152 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 GABRB3P28472 473 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 TLE4Q04727 773 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 CRYMQ14894 314 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 UGT3A1Q6NUS8 523 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 CCDC137Q6PK04 289 aaKnown RBP13.84□□□□□ -0.19
CHD8-211ENST00000556833 CDH24Q86UP0 819 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 CD163Q86VB7 1156 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 ZNF227Q86WZ6 799 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 HORMAD2Q8N7B1 307 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 GPATCH11Q8N954 259 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 C2CD4AQ8NCU7 369 aaPredicted RBP13.84□□□□□ -0.19
CHD8-211ENST00000556833 MCUQ8NE86 351 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 ELP5Q8TE02 316 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 CA5BP1Q8WTZ4 195 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 CHTF18Q8WVB6 975 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 NEIL2Q969S2 332 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 SNF8Q96H20 258 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 OR1F2PQ96R84 312 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 KLHL31Q9H511 634 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 NECTIN3Q9NQS3 549 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 TAS2R13Q9NYV9 303 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 IKZF3Q9UKT9 509 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 NEU2Q9Y3R4 380 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 ASB1Q9Y576 335 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 PCDHGB6Q9Y5F9 930 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 SLC22A7Q9Y694 548 aa13.84□□□□□ -0.19
CHD8-211ENST00000556833 HCFC1P51610 2035 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 TRBV11-1A0A0K0K1C0 115 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 A0A1B0GTH9 108 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 SAGE2PA6NJ88 616 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 PRRG2O14669 202 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 ADAM10O14672 748 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 NRDCO43847 1150 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 HS6ST1O60243 411 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 PRMT3O60678 531 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 HIST1H2AGP0C0S8 130 aaPredicted RBP13.83□□□□□ -0.2
CHD8-211ENST00000556833 HIST1H2ADP20671 130 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 JAK1P23458 1154 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 PPP2R1BP30154 601 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 SSTR2P30874 369 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 MAGEA3P43357 314 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 CYB561P49447 251 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 RIPPLY3P57055 190 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 MLF1P58340 268 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 RGS1Q08116 209 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 SP140Q13342 867 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 PDAP1Q13442 181 aaKnown RBP13.83□□□□□ -0.2
CHD8-211ENST00000556833 RBBP5Q15291 538 aaKnown RBP13.83□□□□□ -0.2
CHD8-211ENST00000556833 TOR1AIP1Q5JTV8 583 aa13.83□□□□□ -0.2
CHD8-211ENST00000556833 C16orf47Q6ZP98 133 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms