RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 MYOD1P15172 320 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 ITGA2P17301 1181 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 ATP5C1P36542 298 aaKnown RBP4.85□□□□□ -1.63
HIF1A-209ENST00000556827 APOBEC1P41238 236 aaKnown RBP4.85□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF132P52740 706 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 AP3M2P53677 418 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 ARF3P61204 181 aaPredicted RBP4.85□□□□□ -1.63
HIF1A-209ENST00000556827 ARF1P84077 181 aaKnown RBP4.85□□□□□ -1.63
HIF1A-209ENST00000556827 ECT2LQ008S8 904 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 PDE1BQ01064 536 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 POU3F1Q03052 451 aaPredicted RBP4.85□□□□□ -1.63
HIF1A-209ENST00000556827 SNRNP35Q16560 246 aaKnown RBP4.85□□□□□ -1.63
HIF1A-209ENST00000556827 PNLIPRP3Q17RR3 467 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 ZSCAN23Q3MJ62 389 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 DCST1Q5T197 706 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 IL27RAQ6UWB1 636 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 OR8K5Q8NH50 307 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 BBS10Q8TAM1 723 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 SETD7Q8WTS6 366 aaKnown RBP4.85□□□□□ -1.63
HIF1A-209ENST00000556827 SORCS1Q8WY21 1168 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 IL17FQ96PD4 163 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 SMC6Q96SB8 1091 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 CBWD1Q9BRT8 395 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 DMAP1Q9NPF5 467 aaPredicted RBP4.85□□□□□ -1.63
HIF1A-209ENST00000556827 DNAJC17Q9NVM6 304 aaKnown RBP4.85□□□□□ -1.63
HIF1A-209ENST00000556827 CGNQ9P2M7 1197 aaKnown RBP4.85□□□□□ -1.63
HIF1A-209ENST00000556827 KLK13Q9UKR3 277 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 ACSL5Q9ULC5 683 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 PADI1Q9ULC6 663 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 MTMR6Q9Y217 621 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 KLHL20Q9Y2M5 609 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 LYVE1Q9Y5Y7 322 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 GPR179Q6PRD1 2367 aa4.85□□□□□ -1.63
HIF1A-209ENST00000556827 MYO15AQ9UKN7 3530 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 DMXL1Q9Y485 3027 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 WDR81Q562E7 1941 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 PTGES3LE9PB15 166 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 EIF3DO15371 548 aaKnown RBP eCLIP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 HCRTO43612 131 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 TIMM44O43615 452 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 OLFM2O95897 454 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 SNRNP70P08621 437 aaKnown RBP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 RALAP11233 206 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 HLA-DOBP13765 273 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 GABRG2P18507 467 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 CDH2P19022 906 aaPredicted RBP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 MCM3P25205 808 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 OXTRP30559 389 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 GARSP41250 739 aaKnown RBP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 PRCPP42785 496 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 CLDN20P56880 219 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 SLC8A3P57103 927 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 TAS2R40P59535 323 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 SNRPFP62306 86 aaKnown RBP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 ASIC1P78348 528 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 PSMD6Q15008 389 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 ADIPOQQ15848 244 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 ASTE1Q2TB18 679 aaPredicted RBP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF699Q32M78 642 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF672Q499Z4 452 aaPredicted RBP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF805Q5CZA5 627 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 NSUN5P2Q63ZY6 315 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 FRG2Q64ET8 278 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 C18orf63Q68DL7 685 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 GFRALQ6UXV0 394 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 RAD9BQ6WBX8 426 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 TPGS1Q6ZTW0 290 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 CHST9Q7L1S5 443 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 TMEM219Q86XT9 240 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 TMEM25Q86YD3 366 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 CBWD2Q8IUF1 395 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 NAXDQ8IW45 347 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 BBS7Q8IWZ6 715 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 C1orf87Q8N0U7 546 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 IQUBQ8NA54 791 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 XXYLT1Q8NBI6 393 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 OR5B17Q8NGF7 314 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 GOLGA5Q8TBA6 731 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 HM13Q8TCT9 377 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 SLC44A1Q8WWI5 657 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 PRCCQ92733 491 aaPredicted RBP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 DNAJC19Q96DA6 116 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 SMARCD1Q96GM5 515 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 PKP4Q99569 1192 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 MRPL45Q9BRJ2 306 aaKnown RBP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 SRSF8Q9BRL6 282 aaKnown RBP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 NUP58Q9BVL2 599 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 TNMDQ9H2S6 317 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 CUEDC2Q9H467 287 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 CWC15Q9P013 229 aaKnown RBP4.84□□□□□ -1.63
HIF1A-209ENST00000556827 VDAC3Q9Y277 283 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF510Q9Y2H8 683 aa4.84□□□□□ -1.63
HIF1A-209ENST00000556827 FANCMQ8IYD8 2048 aa4.84□□□□□ -1.64
HIF1A-209ENST00000556827 DCHS1Q96JQ0 3298 aa4.84□□□□□ -1.64
HIF1A-209ENST00000556827 VWA8A3KMH1 1905 aa4.84□□□□□ -1.64
HIF1A-209ENST00000556827 TICRRQ7Z2Z1 1910 aa4.84□□□□□ -1.64
HIF1A-209ENST00000556827 FRYLO94915 3013 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 IGHV4OR15-8A0A075B7B6 117 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 IGHV1OR15-9A0A0B4J2B8 117 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 A8MZ25 164 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms