RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 AICDAQ9GZX7 198 aa23.29■■□□□ 1.32
SDR39U1-221ENST00000556707 KLHL31Q9H511 634 aa23.29■■□□□ 1.32
SDR39U1-221ENST00000556707 SOX17Q9H6I2 414 aaPredicted RBP23.29■■□□□ 1.32
SDR39U1-221ENST00000556707 ACTR8Q9H981 624 aa23.29■■□□□ 1.32
SDR39U1-221ENST00000556707 GRID1Q9ULK0 1009 aa23.29■■□□□ 1.32
SDR39U1-221ENST00000556707 MAN2B2Q9Y2E5 1009 aa23.29■■□□□ 1.32
SDR39U1-221ENST00000556707 SPTA1P02549 2419 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 COPEO14579 308 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 FFAR3O14843 346 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 GPR42O15529 346 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 GALR3O60755 368 aaPredicted RBP23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 SMIM10L1P0DMW3 83 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 OTX2P32243 289 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 SKP1P63208 163 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 MAT1AQ00266 395 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 SYT16Q17RD7 645 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 LINC00303Q3SY05 128 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 VWA2Q5GFL6 755 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 TOR1AIP1Q5JTV8 583 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 ADNP2Q6IQ32 1131 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 NIPAL1Q6NVV3 410 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 SHISA6Q6ZSJ9 500 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 C4orf33Q8N1A6 199 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 L3MBTL4Q8NA19 623 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 APOBEC4Q8WW27 367 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 WBP1Q96G27 269 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 SMIM10Q96HG1 83 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 NSUN5Q96P11 429 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 IP6K3Q96PC2 410 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 TGIF2Q9GZN2 237 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 NOL11Q9H8H0 719 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 ZBTB26Q9HCK0 441 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 C14orf105Q9NVL8 296 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 KCNMB2Q9Y691 235 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 DOCK10Q96BY6 2186 aa23.28■■□□□ 1.32
SDR39U1-221ENST00000556707 LRIT2A6NDA9 550 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 OR7A17O14581 309 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 RDH16O75452 317 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 ERLIN1O75477 346 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 TBX6O95947 436 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 PROCP04070 461 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 HPDP32754 393 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 CCNG1P51959 295 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 HERVK_113P63132 956 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 KLC1Q07866 573 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 CCDC153Q494R4 210 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 DEFB134Q4QY38 66 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 PCSK4Q6UW60 755 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 MYLK4Q86YV6 388 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 SLC22A9Q8IVM8 553 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 PRSS58Q8IYP2 241 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 OR7G3Q8NG95 312 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 ZNF483Q8TF39 744 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 ATP6V1E2Q96A05 226 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 GAL3ST3Q96A11 431 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 NTMT1Q9BV86 223 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 ERVK-6Q9BXR3 956 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 PCSK5Q92824 1860 aa23.27■■□□□ 1.32
SDR39U1-221ENST00000556707 COL6A6A6NMZ7 2263 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 CCDC151A5D8V7 595 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 PLIN3O60664 434 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 MMP11P24347 488 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 SERPINB1P30740 379 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 HNRNPH1P31943 449 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 CCR10P46092 362 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 PRKAA2P54646 552 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 RAB8AP61006 207 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 ZNF844Q08AG5 666 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 ADPRMQ3LIE5 342 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 MRGPREQ86SM8 312 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 ZC3H7AQ8IWR0 971 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 IQCKQ8N0W5 287 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 OR52B6Q8NGF0 335 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 OR51Q1Q8NH59 317 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 ZNF473Q8WTR7 871 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 NACC2Q96BF6 587 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 MS4A6EQ96DS6 147 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 CRB3Q9BUF7 120 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 SEMA4BQ9NPR2 832 aaPredicted RBP23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 SEMA3GQ9NS98 782 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 MKS1Q9NXB0 559 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 HCN3Q9P1Z3 774 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 RNF11Q9Y3C5 154 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 TSC22D4Q9Y3Q8 395 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 PCDHGA11Q9Y5H2 935 aa23.26■■□□□ 1.31
SDR39U1-221ENST00000556707 ZNF860A6NHJ4 632 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 C4orf51C9J302 202 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 ATXN7O15265 892 aaPredicted RBP23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 BMP10O95393 424 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 CLDN9O95484 217 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 B3GALT4O96024 378 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 IGHEP01854 428 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 PCNAP12004 261 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 IMPDH1P20839 514 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 ATP1A4Q13733 1029 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 KRT71Q3SY84 523 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 ZNF678Q5SXM1 525 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 RPS27LQ71UM5 84 aaKnown RBP23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 PPP1R32Q7Z5V6 425 aa23.25■■□□□ 1.31
SDR39U1-221ENST00000556707 LAPTM4BQ86VI4 370 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms