RNA–Protein interactions for RNA: ENST00000556530.1

PNN-205, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2 BASIC

Gene PNN, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-205ENST00000556530 SYVN1Q86TM6 617 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 GOLGA6L1Q8N7Z2 621 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 HUS1BQ8NHY5 278 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 UTP15Q8TED0 518 aaKnown RBP18.79■□□□□ 0.6
PNN-205ENST00000556530 ZNF473Q8WTR7 871 aaKnown RBP18.79■□□□□ 0.6
PNN-205ENST00000556530 F2RL3Q96RI0 385 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 MTERF1Q99551 399 aaKnown RBP18.79■□□□□ 0.6
PNN-205ENST00000556530 PAIP2Q9BPZ3 127 aaKnown RBP18.79■□□□□ 0.6
PNN-205ENST00000556530 SHCBP1LQ9BZQ2 653 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 SLC6A16Q9GZN6 736 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 CPNE5Q9HCH3 593 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 MLXIPLQ9NP71 852 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 SLC22A11Q9NSA0 550 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 KCND3Q9UK17 655 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 NAALAD2Q9Y3Q0 740 aa18.79■□□□□ 0.6
PNN-205ENST00000556530 TPRP12270 2363 aaKnown RBP18.78■□□□□ 0.6
PNN-205ENST00000556530 A0A0G2JN53 185 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 ZNF860A6NHJ4 632 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 C21orf140B9A014 251 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 H0YIV9 168 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 EFSO43281 561 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 KLHL18O94889 574 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 CAPN1P07384 714 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 ALOX12P18054 663 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 PTPN4P29074 926 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 HNRNPH1P31943 449 aaKnown RBP18.78■□□□□ 0.6
PNN-205ENST00000556530 FOXL2P58012 376 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 PHEXP78562 749 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 MAT1AQ00266 395 aaKnown RBP18.78■□□□□ 0.6
PNN-205ENST00000556530 HERC3Q15034 1050 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 NCF4Q15080 339 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 SYT16Q17RD7 645 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 DEFB134Q4QY38 66 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 AGBL2Q5U5Z8 902 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 LETMD1Q6P1Q0 360 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 COX15Q7KZN9 410 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 CDYL2Q8N8U2 506 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 SREK1Q8WXA9 508 aaKnown RBP18.78■□□□□ 0.6
PNN-205ENST00000556530 TLCD1Q96CP7 247 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 MVB12AQ96EY5 273 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 SEC16BQ96JE7 1060 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 PKNOX2Q96KN3 472 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 C17orf62Q9BQA9 187 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 GATA5Q9BWX5 397 aaPredicted RBP18.78■□□□□ 0.6
PNN-205ENST00000556530 GPR87Q9BY21 358 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 AICDAQ9GZX7 198 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 ACTL8Q9H568 366 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 VIPAS39Q9H9C1 493 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 MID1IP1Q9NPA3 183 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 TRPC4Q9UBN4 977 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 SLC22A7Q9Y694 548 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 FRYQ5TBA9 3013 aa18.78■□□□□ 0.6
PNN-205ENST00000556530 LRIT2A6NDA9 550 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 SAP18O00422 153 aaKnown RBP18.77■□□□□ 0.6
PNN-205ENST00000556530 TERTO14746 1132 aaKnown RBP18.77■□□□□ 0.6
PNN-205ENST00000556530 TM9SF1O15321 606 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 PRPF4O43172 522 aaKnown RBP eCLIP18.77■□□□□ 0.65e-7■□□□□ 8.9
PNN-205ENST00000556530 ERI3O43414 337 aaKnown RBP18.77■□□□□ 0.6
PNN-205ENST00000556530 ZWINTO95229 277 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 BPGMP07738 259 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 RAB40ALP0C0E4 278 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 PLA2G16P53816 162 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 TMPRSS3P57727 454 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 RPS13P62277 151 aaKnown RBP18.77■□□□□ 0.6
PNN-205ENST00000556530 BTN3A2P78410 334 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 LCP2Q13094 533 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 IFT88Q13099 833 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 MPP2Q14168 576 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 SHISA6Q6ZSJ9 500 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 ZCCHC23Q6ZST2 131 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 OVCH1Q7RTY7 1134 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 PDSS2Q86YH6 399 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 NUDCD3Q8IVD9 361 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 PRSS58Q8IYP2 241 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 ZSCAN1Q8NBB4 408 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 PPP1R14CQ8TAE6 165 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 MGARPQ8TDB4 240 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 MS4A6EQ96DS6 147 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 FAR2Q96K12 515 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 MAGEB10Q96LZ2 347 aaPredicted RBP18.77■□□□□ 0.6
PNN-205ENST00000556530 ZNF382Q96SR6 550 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 REXO4Q9GZR2 422 aaKnown RBP18.77■□□□□ 0.6
PNN-205ENST00000556530 OR51B5Q9H339 312 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 ELOVL6Q9H5J4 265 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 HCN3Q9P1Z3 774 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 CTSFQ9UBX1 484 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 TRPS1Q9UHF7 1281 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 ADGRE2Q9UHX3 823 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 ZNF225Q9UK10 706 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 STK38LQ9Y2H1 464 aa18.77■□□□□ 0.6
PNN-205ENST00000556530 PTRH2Q9Y3E5 179 aaKnown RBP18.77■□□□□ 0.6
PNN-205ENST00000556530 ACACBO00763 2458 aa18.76■□□□□ 0.59
PNN-205ENST00000556530 WDFY3Q8IZQ1 3526 aa18.76■□□□□ 0.59
PNN-205ENST00000556530 TMEM120BA0PK00 339 aa18.76■□□□□ 0.59
PNN-205ENST00000556530 MAGEB17A8MXT2 336 aa18.76■□□□□ 0.59
PNN-205ENST00000556530 C4orf51C9J302 202 aa18.76■□□□□ 0.59
PNN-205ENST00000556530 RDH16O75452 317 aa18.76■□□□□ 0.59
PNN-205ENST00000556530 CRCPO75575 148 aa18.76■□□□□ 0.59
PNN-205ENST00000556530 NSA2O95478 260 aaKnown RBP18.76■□□□□ 0.59
PNN-205ENST00000556530 PRKAR1AP10644 381 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms