RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 GSTM2P28161 218 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 XCR1P46094 333 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 PGDP52209 483 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 STXBP1P61764 594 aaKnown RBP14.37□□□□□ -0.11
ACTN1-217ENST00000556203 VSNL1P62760 191 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 OLR1P78380 273 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 LAPTM5Q13571 262 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 RAPSNQ13702 412 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 NAA30Q147X3 362 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-217ENST00000556203 TBCCQ15814 346 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 TUBB8Q3ZCM7 444 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 PAGE2BQ5JRK9 111 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 MFSD4BQ5TF39 518 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 FAAH2Q6GMR7 532 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 ASB18Q6ZVZ8 466 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 TEX9Q8N6V9 391 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 PTGR2Q8N8N7 351 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-217ENST00000556203 OR11G2Q8NGC1 345 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 OR5T3Q8NGG3 340 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 C8orf44Q96CB5 159 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 SEC16BQ96JE7 1060 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 VPS50Q96JG6 964 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 ATP13A2Q9NQ11 1180 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 MKL2Q9ULH7 1088 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 ZNF490Q9ULM2 529 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-217ENST00000556203 G3BP2Q9UN86 482 aaKnown RBP14.37□□□□□ -0.11
ACTN1-217ENST00000556203 ANGPTL3Q9Y5C1 460 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 PCDHGA9Q9Y5G4 932 aaKnown RBP14.37□□□□□ -0.11
ACTN1-217ENST00000556203 HEMK1Q9Y5R4 338 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-217ENST00000556203 ANKDD1BA6NHY2 528 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 LRRC14BA6NHZ5 514 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 DNAJB6O75190 326 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 CLEC3AO75596 197 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 WFS1O76024 890 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 SIX3O95343 332 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-217ENST00000556203 CASP2P42575 452 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 SKP1P63208 163 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 AIMP2Q13155 320 aaKnown RBP14.36□□□□□ -0.11
ACTN1-217ENST00000556203 PCBP2Q15366 365 aaKnown RBP eCLIP14.36□□□□□ -0.118e-6■■□□□ 13.7
ACTN1-217ENST00000556203 HIST2H2ACQ16777 129 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-217ENST00000556203 MINDY4Q4G0A6 757 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 HIST2H2AA3Q6FI13 130 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 ADNP2Q6IQ32 1131 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 NIPAL1Q6NVV3 410 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 VN1R5Q7Z5H4 357 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 GALNT16Q8N428 558 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 PHF21BQ96EK2 531 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 PEX11GQ96HA9 241 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 MRPL57Q9BQC6 102 aaKnown RBP14.36□□□□□ -0.11
ACTN1-217ENST00000556203 NUDT9Q9BW91 350 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 RBCK1Q9BYM8 510 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 VN1R1Q9GZP7 353 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 AICDAQ9GZX7 198 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 PRM3Q9NNZ6 103 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 MLXIPLQ9NP71 852 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 GPR83Q9NYM4 423 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.36□□□□□ -0.11
ACTN1-217ENST00000556203 TBK1Q9UHD2 729 aa14.36□□□□□ -0.11
ACTN1-217ENST00000556203 TNPO3Q9Y5L0 923 aaKnown RBP14.36□□□□□ -0.11
ACTN1-217ENST00000556203 V9GYY5 206 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-217ENST00000556203 LRIT2A6NDA9 550 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 C4orf51C9J302 202 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 GOLGA8RI6L899 631 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 E2F3O00716 465 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 CHST10O43529 356 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 SMIM24O75264 130 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 CDC123O75794 336 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-217ENST00000556203 SMIM10L1P0DMW3 83 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 ITGA3P26006 1051 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 EEF1DP29692 281 aaKnown RBP14.35□□□□□ -0.11
ACTN1-217ENST00000556203 HNRNPH1P31943 449 aaKnown RBP14.35□□□□□ -0.11
ACTN1-217ENST00000556203 SLCO1A2P46721 670 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 EFNA3P52797 238 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 BTN3A2P78410 334 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 EEF1A2Q05639 463 aaKnown RBP14.35□□□□□ -0.11
ACTN1-217ENST00000556203 PCDH1Q08174 1060 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 GTF2H2Q13888 395 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 E2F2Q14209 437 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 GTF2H2CQ6P1K8 395 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 MED27Q6P2C8 311 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 PRICKLE2Q7Z3G6 844 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 GOLGA7Q7Z5G4 137 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 ZNF605Q86T29 641 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 MYLK4Q86YV6 388 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-217ENST00000556203 UBE2E3Q969T4 207 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 GAL3ST3Q96A11 431 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 MS4A6EQ96DS6 147 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 SMIM10Q96HG1 83 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 MRPL46Q9H2W6 279 aaKnown RBP14.35□□□□□ -0.11
ACTN1-217ENST00000556203 RHBGQ9H310 441 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 TMCO1Q9UM00 188 aa14.35□□□□□ -0.11
ACTN1-217ENST00000556203 A0A0G2JN53 185 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 OR2W5A6NFC9 320 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 SMIM23A6NLE4 172 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 STX16-NPEPL1H3BU86 382 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 STX16O14662 325 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 ERI3O43414 337 aaKnown RBP14.34□□□□□ -0.11
ACTN1-217ENST00000556203 TBX6O95947 436 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-217ENST00000556203 HPP00738 406 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 C8orf89P0DMQ9 161 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms