RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 AIREO43918 545 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PCDH7O60245 1069 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PCDHGA12O60330 932 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ATP6V1G1O75348 118 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 WBP4O75554 376 aaKnown RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 SERPINB7O75635 380 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ANXA8P13928 327 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 FSHRP23945 695 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 EPHA2P29317 976 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PPM1AP35813 382 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 GGT2P36268 569 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 NNMTP40261 264 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ETV3P41162 512 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 NCS1P62166 190 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 SELENOWP63302 87 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 KCNJ10P78508 379 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 TLE2Q04725 743 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 RBBP4Q09028 425 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ZNF763Q0D2J5 394 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 FCHO2Q0JRZ9 810 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ELOAQ14241 798 aaKnown RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 TRIM60Q495X7 471 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 IFI44LQ53G44 452 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 GCNT6Q5T4J0 391 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 TMEM236Q5W0B7 351 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 HIST2H2AA3Q6FI13 130 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 MED27Q6P2C8 311 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 TRIM40Q6P9F5 258 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 Q6ZVL8 140 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 HSD11B1LQ7Z5J1 315 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ZNF605Q86T29 641 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 KLHDC8AQ8IYD2 350 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ENTHD1Q8IYW4 607 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 MFSD4AQ8N468 514 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 CHST14Q8NCH0 376 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 KBTBD8Q8NFY9 601 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 OR7G3Q8NG95 312 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 HUS1BQ8NHY5 278 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 MCFD2Q8NI22 146 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 CHTF18Q8WVB6 975 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 SLC38A4Q969I6 547 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 MAL2Q969L2 176 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 COQ8BQ96D53 544 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 LMLNQ96KR4 655 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 C7orf34Q96L11 122 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 KCNC2Q96PR1 638 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 HEPHQ9BQS7 1158 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 CCM2Q9BSQ5 444 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 RIOK2Q9BVS4 552 aaKnown RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 CHST8Q9H2A9 424 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ASAH2Q9NR71 780 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 IMPAD1Q9NX62 359 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 SLCO3A1Q9UIG8 710 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 RNF6Q9Y252 685 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 POFUT2Q9Y2G5 429 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 DYRK1BQ9Y463 629 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 TESMINQ9Y4I5 508 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 SAGE2PA6NJ88 616 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 SGTAO43765 313 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 KDM1AO60341 852 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 SH3BGRLO75368 114 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 SLC16A8O95907 504 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 LCKP06239 509 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 CCNYL3P0C7X3 344 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 BMP4P12644 408 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 POLR2EP19388 210 aaKnown RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 IDSP22304 550 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 CD6P30203 668 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 CHI3L1P36222 383 aaPredicted RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 CTSKP43235 329 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 BDKRB1P46663 353 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PREPP48147 710 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 GSSP48637 474 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 OLR1P78380 273 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 RAE1P78406 368 aaKnown RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 SPIBQ01892 262 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PCDH1Q08174 1060 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PPIGQ13427 754 aaKnown RBP eCLIP6.73□□□□□ -1.33
TDP1-213ENST00000555880 GAB1Q13480 694 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 TSTA3Q13630 321 aaPredicted RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 TBCEQ15813 527 aaPredicted RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 TIGD6Q17RP2 521 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 FBXO43Q4G163 708 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 HENMT1Q5T8I9 393 aaKnown RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 ERAP2Q6P179 960 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 TUBA3EQ6PEY2 450 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PLEKHG7Q6ZR37 379 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 USP43Q70EL4 1123 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PAGE2Q7Z2X7 111 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 BTLAQ7Z6A9 289 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 TMPRSS11BQ86T26 416 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 TMC8Q8IU68 726 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 RASGRP3Q8IV61 690 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 GPR65Q8IYL9 337 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 OXR1Q8N573 874 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 AMER2Q8N7J2 671 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 OR10G2Q8NGC3 310 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 OR2A12Q8NGT7 310 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 OR56A3Q8NH54 315 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms