RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 DUPD1Q68J44 220 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 HIBCHQ6NVY1 386 aaPredicted RBP10.18□□□□□ -0.78
TDP1-212ENST00000555565 CPEB2Q7Z5Q1 589 aaKnown RBP10.18□□□□□ -0.78
TDP1-212ENST00000555565 CREG2Q8IUH2 290 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 KLHL7Q8IXQ5 586 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 PDIK1LQ8N165 341 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 GPATCH11Q8N954 259 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 MFSD9Q8NBP5 474 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 ZNF740Q8NDX6 193 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 OR4K1Q8NGD4 311 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 METTL21AQ8WXB1 218 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 CFAP36Q96G28 342 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 SNF8Q96H20 258 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 HIST1H2AHQ96KK5 128 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 OR4K3Q96R72 315 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 OLFM1Q99784 485 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 HIST1H2AJQ99878 128 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 HAUS8Q9BT25 410 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 H2AFJQ9BTM1 129 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 SARGQ9BW04 601 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 FAM129AQ9BZQ8 928 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 RNF32Q9H0A6 362 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 GSX1Q9H4S2 264 aaPredicted RBP10.18□□□□□ -0.78
TDP1-212ENST00000555565 GRPEL1Q9HAV7 217 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 ANKHQ9HCJ1 492 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 IKZF3Q9UKT9 509 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 CORO1CQ9ULV4 474 aaPredicted RBP10.18□□□□□ -0.78
TDP1-212ENST00000555565 VWA7Q9Y334 891 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 NAALAD2Q9Y3Q0 740 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 SLC22A7Q9Y694 548 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 OR5H15A6NDH6 313 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 ZNF860A6NHJ4 632 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 ADAM10O14672 748 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 GUCA1CO95843 209 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 SLC35G6P0C7Q6 338 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 ESRRAP11474 423 aaPredicted RBP10.17□□□□□ -0.78
TDP1-212ENST00000555565 GRK3P35626 688 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 CCR8P51685 355 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 AP2B1P63010 937 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 PMP22Q01453 160 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 PPP1R3AQ16821 1122 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 BTBD16Q32M84 506 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 CATSPEREQ5SY80 951 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 ABHD17BQ5VST6 288 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 PLAG1Q6DJT9 500 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 FAM45BPQ6NSW5 357 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 MEX3BQ6ZN04 569 aaKnown RBP10.17□□□□□ -0.78
TDP1-212ENST00000555565 SYDE1Q6ZW31 735 aaPredicted RBP10.17□□□□□ -0.78
TDP1-212ENST00000555565 ANKRD37Q7Z713 158 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 TGIF2LYQ8IUE0 185 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 SPPL2CQ8IUH8 684 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 CHERPQ8IWX8 916 aaKnown RBP10.17□□□□□ -0.78
TDP1-212ENST00000555565 AFAP1L2Q8N4X5 818 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 OR5T3Q8NGG3 340 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 FAM45AQ8TCE6 357 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 THAP3Q8WTV1 239 aaPredicted RBP10.17□□□□□ -0.78
TDP1-212ENST00000555565 NEIL2Q969S2 332 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 FBXL8Q96CD0 374 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 LRRC39Q96DD0 335 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 PDLIM5Q96HC4 596 aaKnown RBP10.17□□□□□ -0.78
TDP1-212ENST00000555565 CAPZA3Q96KX2 299 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 TRIM51Q9BSJ1 452 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 RBCK1Q9BYM8 510 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 TRIM54Q9BYV2 358 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.17□□□□□ -0.78
TDP1-212ENST00000555565 SPNS1Q9H2V7 528 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 DLL4Q9NR61 685 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 LANCL2Q9NS86 450 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 STMN3Q9NZ72 180 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 C19orf25Q9UFG5 118 aaPredicted RBP10.17□□□□□ -0.78
TDP1-212ENST00000555565 PSAT1Q9Y617 370 aa10.17□□□□□ -0.78
TDP1-212ENST00000555565 TRBC2A0A5B9 178 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 CTAGE15A4D2H0 777 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 A8MUI8 341 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 TTI1O43156 1089 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 NDUFS4O43181 175 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 OR1F1O43749 312 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 DNAJB6O75190 326 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 SEC31AO94979 1220 aaKnown RBP10.16□□□□□ -0.78
TDP1-212ENST00000555565 ENO2P09104 434 aaPredicted RBP10.16□□□□□ -0.78
TDP1-212ENST00000555565 ZNF37AP17032 561 aaPredicted RBP10.16□□□□□ -0.78
TDP1-212ENST00000555565 DNAJA1P31689 397 aaKnown RBP10.16□□□□□ -0.78
TDP1-212ENST00000555565 AGTR2P50052 363 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 ITGA8P53708 1063 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 IST1P53990 364 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 DR1Q01658 176 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 RHAGQ02094 409 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 RBPJQ06330 500 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 ZNF33BQ06732 778 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 PWP1Q13610 501 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 FRG1Q14331 258 aaKnown RBP10.16□□□□□ -0.78
TDP1-212ENST00000555565 FASTKD3Q14CZ7 662 aaKnown RBP10.16□□□□□ -0.78
TDP1-212ENST00000555565 ABRAXAS2Q15018 415 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 HERC3Q15034 1050 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 FCRLBQ6BAA4 426 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 H3F3CQ6NXT2 135 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 SBSNQ6UWP8 590 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 STRA8Q7Z7C7 330 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 CTAGE6Q86UF2 777 aa10.16□□□□□ -0.78
TDP1-212ENST00000555565 ZC3HC1Q86WB0 502 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms