RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 COX4I1P13073 169 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 SERPINB1P30740 379 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 GRK6P43250 576 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 ATP4BP51164 291 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 RAP1GDS1P52306 607 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 VSX2P58304 361 aaPredicted RBP9.73□□□□□ -0.85
SRP54-208ENST00000555557 RAB8AP61006 207 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 KCNAB1Q14722 419 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 SMU1Q2TAY7 513 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 PDCD4Q53EL6 469 aaKnown RBP9.73□□□□□ -0.85
SRP54-208ENST00000555557 SPIN4Q56A73 249 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 TOR1AIP1Q5JTV8 583 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 ZNF574Q6ZN55 896 aaPredicted RBP9.73□□□□□ -0.85
SRP54-208ENST00000555557 RNF44Q7L0R7 432 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 METTL4Q8N3J2 472 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 FBXO27Q8NI29 283 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 MS4A6EQ96DS6 147 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 CNDP2Q96KP4 475 aaKnown RBP9.73□□□□□ -0.85
SRP54-208ENST00000555557 PRRX2Q99811 253 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 C17orf62Q9BQA9 187 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 EDEM2Q9BV94 578 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 ZNF717Q9BY31 904 aaPredicted RBP9.73□□□□□ -0.85
SRP54-208ENST00000555557 LHX9Q9NQ69 397 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 SOHLH2Q9NX45 425 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 NCDNQ9UBB6 729 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 TAGLN3Q9UI15 199 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 PPT2Q9UMR5 302 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 RUVBL1Q9Y265 456 aaKnown RBP9.73□□□□□ -0.85
SRP54-208ENST00000555557 TMED5Q9Y3A6 229 aa9.73□□□□□ -0.85
SRP54-208ENST00000555557 GNG14A0A1W2PPG7 69 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 ARHGAP10A1A4S6 786 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 NR5A2O00482 541 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 ERI3O43414 337 aaKnown RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 AKAP10O43572 662 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 GDF9O60383 454 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 MYO1DO94832 1006 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 KIAA0754O94854 1291 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 LDOC1O95751 146 aaPredicted RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 LMNAP02545 664 aaKnown RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 CD59P13987 128 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 TPP2P29144 1249 aaPredicted RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 TIA1P31483 386 aaKnown RBP eCLIP9.72□□□□□ -0.854e-9■■■■□ 19.7
SRP54-208ENST00000555557 BSGP35613 385 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 ZFP36L2P47974 494 aaKnown RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 CYLC2Q14093 348 aaPredicted RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 VPS26BQ4G0F5 336 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 WDR74Q6RFH5 385 aaPredicted RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 MCATQ8IVS2 390 aaKnown RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 DNAJC22Q8N4W6 341 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 ZCCHC10Q8TBK6 192 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 NAT6Q93015 286 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 RERGQ96A58 199 aaPredicted RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 RGMAQ96B86 450 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 TM4SF19Q96DZ7 209 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 TCTN2Q96GX1 697 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 FCRL1Q96LA6 429 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 TEFMQ96QE5 360 aaKnown RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 LRRN3Q9H3W5 708 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 EPB41L1Q9H4G0 881 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 CXorf56Q9H5V9 222 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 ASIC5Q9NY37 505 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 PCDHGB2Q9Y5G2 931 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 RALGAPA1Q6GYQ0 2036 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 MDC1Q14676 2089 aaKnown RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 C4orf47A7E2U8 309 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 SLC22A2O15244 555 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 FLRT2O43155 660 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 UNC5CO95185 931 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 SLC35G6P0C7Q6 338 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 THRAP10827 490 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 PRPS2P11908 318 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 CKMT2P17540 419 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 GSTM2P28161 218 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 MAPK1P28482 360 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 ADSLP30566 484 aaPredicted RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 MLLT3P42568 568 aaPredicted RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 DGKQP52824 942 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 RELAQ04206 551 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 RGS1Q08116 209 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 PWP1Q13610 501 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 ADPRMQ3LIE5 342 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 LACTB2Q53H82 288 aaPredicted RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 OR4C11Q6IEV9 310 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 TMEM71Q6P5X7 295 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 GALNT18Q6P9A2 607 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 ZNF793Q6ZN11 406 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 RINLQ6ZS11 566 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 YTHDF3Q7Z739 585 aaKnown RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 RCBTB1Q8NDN9 531 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 RP9Q8TA86 221 aaKnown RBP9.72□□□□□ -0.85
SRP54-208ENST00000555557 NT5CQ8TCD5 201 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 VPS33AQ96AX1 596 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 CMTM5Q96DZ9 223 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 CD180Q99467 661 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 CENPKQ9BS16 269 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 DPY30Q9C005 99 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 SLC6A16Q9GZN6 736 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 PDE7BQ9NP56 450 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 TMEM9BQ9NQ34 198 aa9.72□□□□□ -0.85
SRP54-208ENST00000555557 AHSPQ9NZD4 102 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms