RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 RAB8AP61006 207 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 TGFBIQ15582 683 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 C18orf21Q32NC0 220 aaPredicted RBP23.05■■□□□ 1.28
PRKCH-216ENST00000555542 SUN3Q8TAQ9 357 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 TBC1D20Q96BZ9 403 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 RHBDF1Q96CC6 855 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 GPR22Q99680 433 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 CPAMD8Q8IZJ3 1885 aa23.05■■□□□ 1.28
PRKCH-216ENST00000555542 FAM159BA6NKW6 160 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 CHST10O43529 356 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 FHP07954 510 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 TNFSF10P50591 281 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 CKAP4Q07065 602 aaKnown RBP23.04■■□□□ 1.28
PRKCH-216ENST00000555542 SFT2D3Q587I9 215 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 TOR1AIP1Q5JTV8 583 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 PLAG1Q6DJT9 500 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 GPSM1Q86YR5 675 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 TCAIMQ8N3R3 496 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 AMER2Q8N7J2 671 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 PPM1NQ8N819 430 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 ANKRD53Q8N9V6 530 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 ST6GALNAC3Q8NDV1 305 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 FBXO25Q8TCJ0 367 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 UTP15Q8TED0 518 aaKnown RBP23.04■■□□□ 1.28
PRKCH-216ENST00000555542 FAR1Q8WVX9 515 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 CCT6BQ92526 530 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 HAS2Q92819 552 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 CNOT10Q9H9A5 744 aaKnown RBP23.04■■□□□ 1.28
PRKCH-216ENST00000555542 KCNK13Q9HB14 408 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 STMN3Q9NZ72 180 aa23.04■■□□□ 1.28
PRKCH-216ENST00000555542 CNTRLQ7Z7A1 2325 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 PSMD12O00232 456 aaPredicted RBP23.03■■□□□ 1.28
PRKCH-216ENST00000555542 B4GALT2O60909 372 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 WDPCPO95876 746 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 S100BP04271 92 aaPredicted RBP23.03■■□□□ 1.28
PRKCH-216ENST00000555542 C1GALT1C1LP0DN25 315 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 MYBL2P10244 700 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 STX2P32856 288 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 SPRP35270 261 aaPredicted RBP23.03■■□□□ 1.28
PRKCH-216ENST00000555542 MAGEA4P43358 317 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 GPX6P59796 221 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 ATP6V0D1P61421 351 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 RHAGQ02094 409 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 SLMAPQ14BN4 828 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 EXT1Q16394 746 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 RPUSD3Q6P087 351 aaKnown RBP23.03■■□□□ 1.28
PRKCH-216ENST00000555542 PAPD4Q6PIY7 484 aaKnown RBP23.03■■□□□ 1.28
PRKCH-216ENST00000555542 RAPH1Q70E73 1250 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 BCORP1Q8N888 145 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 EXT2Q93063 718 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 TSLPQ969D9 159 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 LPAR4Q99677 370 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 BARD1Q99728 777 aaKnown RBP23.03■■□□□ 1.28
PRKCH-216ENST00000555542 PHACTR1Q9C0D0 580 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 PRM3Q9NNZ6 103 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 CD274Q9NZQ7 290 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 SCN2AQ99250 2005 aa23.03■■□□□ 1.28
PRKCH-216ENST00000555542 MAGEB17A8MXT2 336 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 SLC6A12P48065 614 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 OR4D2P58180 307 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 RAB10P61026 200 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 STXBP1P61764 594 aaKnown RBP23.02■■□□□ 1.28
PRKCH-216ENST00000555542 SLBPQ14493 270 aaKnown RBP eCLIP23.02■■□□□ 1.28
PRKCH-216ENST00000555542 KBTBD12Q3ZCT8 623 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 GRTP1Q5TC63 336 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 CYS1Q717R9 158 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.02■■□□□ 1.28
PRKCH-216ENST00000555542 KRT78Q8N1N4 520 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 SNX31Q8N9S9 440 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 PLPP5Q8NEB5 264 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 TTLQ8NG68 377 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 CAPS2Q9BXY5 557 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 SLC6A16Q9GZN6 736 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 RHBGQ9H310 441 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 LANCL2Q9NS86 450 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 OLAHQ9NV23 265 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 ABI3Q9P2A4 366 aa23.02■■□□□ 1.28
PRKCH-216ENST00000555542 CTAGE15A4D2H0 777 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 OR5H15A6NDH6 313 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 CLGNO14967 610 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 DNAJB6O75190 326 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 DDAH2O95865 285 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 SERPINA6P08185 405 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 EDN3P14138 238 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 CD1DP15813 335 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 FCRLBQ6BAA4 426 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 C8orf74Q6P047 294 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 TMIGD1Q6UXZ0 262 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 CTAGE6Q86UF2 777 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 CYP4X1Q8N118 509 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 FBF1Q8TES7 1133 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 FAR2Q96K12 515 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 ZNF354BQ96LW1 612 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 C5orf34Q96MH7 638 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 RNF32Q9H0A6 362 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 KLHL31Q9H511 634 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 DNAJC11Q9NVH1 559 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 RNF112Q9ULX5 631 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 SLC5A6Q9Y289 635 aa23.01■■□□□ 1.27
PRKCH-216ENST00000555542 LRRK2Q5S007 2527 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms