RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 UBASH3AP57075 661 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 DDX10Q13206 875 aaKnown RBP1.94□□□□□ -2.1
SRP54-207ENST00000555535 IL11RAQ14626 422 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 CCL14Q16627 93 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 TEX35Q5T0J7 233 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 ZBTB49Q6ZSB9 765 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 ANKRD33Q7Z3H0 272 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 RYBPQ8N488 228 aaPredicted RBP1.94□□□□□ -2.1
SRP54-207ENST00000555535 ZNF721Q8TF20 911 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 TEKT4Q8WW24 435 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 RBM41Q96IZ5 413 aaKnown RBP1.94□□□□□ -2.1
SRP54-207ENST00000555535 LURAP1Q96LR2 239 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 MRPL1Q9BYD6 325 aaKnown RBP1.94□□□□□ -2.1
SRP54-207ENST00000555535 PDE7BQ9NP56 450 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 KCNMB3Q9NPA1 279 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 PLSCR3Q9NRY6 295 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 DEPPQ9NTK1 212 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 HAUS2Q9NVX0 235 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 ARMCX1Q9P291 453 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 POLKQ9UBT6 870 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 ADD3Q9UEY8 706 aaKnown RBP1.94□□□□□ -2.1
SRP54-207ENST00000555535 RNF123Q5XPI4 1314 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 TRAV9-2A0A087WT02 112 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 hCG_1807616A0A1W2PRN6 198 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 GLOD5A6NK44 160 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 INPP4BO15327 924 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 PROS1P07225 676 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 YES1P07947 543 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 RIPK4P57078 832 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 UBXN2AP68543 259 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 ILF2Q12905 390 aaKnown RBP1.93□□□□□ -2.1
SRP54-207ENST00000555535 EPS8Q12929 822 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 PTGISQ16647 500 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 LACTB2Q53H82 288 aaPredicted RBP1.93□□□□□ -2.1
SRP54-207ENST00000555535 FAM205BPQ63HN1 556 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 CGB2Q6NT52 195 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 MAATS1Q7Z4T9 603 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 CAMKMTQ7Z624 323 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 U2AF1L4Q8WU68 220 aaKnown RBP1.93□□□□□ -2.1
SRP54-207ENST00000555535 NSUN4Q96CB9 384 aaKnown RBP1.93□□□□□ -2.1
SRP54-207ENST00000555535 RSRC1Q96IZ7 334 aaKnown RBP1.93□□□□□ -2.1
SRP54-207ENST00000555535 ABHD1Q96SE0 405 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 PSMD1Q99460 953 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 IL12RB2Q99665 862 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 DEFB126Q9BYW3 111 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 FNDC4Q9H6D8 234 aaPredicted RBP1.93□□□□□ -2.1
SRP54-207ENST00000555535 PHPT1Q9NRX4 125 aaPredicted RBP1.93□□□□□ -2.1
SRP54-207ENST00000555535 TBC1D29Q9UFV1 150 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 POLLQ9UGP5 575 aa1.93□□□□□ -2.1
SRP54-207ENST00000555535 FER1L5A0AVI2 2057 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 H3BMM5 538 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 TSC22D2O75157 780 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 IGHG3P01860 377 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 ALOX5P09917 674 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 FCGR2BP31994 310 aaPredicted RBP1.92□□□□□ -2.1
SRP54-207ENST00000555535 FCGR2CP31995 323 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 EIF2DP41214 584 aaKnown RBP1.92□□□□□ -2.1
SRP54-207ENST00000555535 RGRP47804 291 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 RPL34P49207 117 aaKnown RBP1.92□□□□□ -2.1
SRP54-207ENST00000555535 CRYBA2P53672 197 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 IST1P53990 364 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 NAAAQ02083 359 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 RALGDSQ12967 914 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 CHAF1BQ13112 559 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 PTPRCAPQ14761 206 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 PIGWQ7Z7B1 504 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 DNAAF5Q86Y56 855 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 SLC4A11Q8NBS3 891 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 OR1B1Q8NGR6 318 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 PPP1R16AQ96I34 528 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 LINC00615Q96LM1 132 aaPredicted RBP1.92□□□□□ -2.1
SRP54-207ENST00000555535 RUNDC3BQ96NL0 473 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 GCNAQ96QF7 691 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 TNFRSF13CQ96RJ3 184 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 ZNF275Q9NSD4 429 aaPredicted RBP1.92□□□□□ -2.1
SRP54-207ENST00000555535 THYN1Q9P016 225 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 TBC1D7Q9P0N9 293 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 CLEC4EQ9ULY5 219 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 PCDHGB4Q9UN71 923 aa1.92□□□□□ -2.1
SRP54-207ENST00000555535 MRPL11Q9Y3B7 192 aaKnown RBP1.92□□□□□ -2.1
SRP54-207ENST00000555535 HEG1Q9ULI3 1381 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 LMO7DNF2Z398 122 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 CLDN4O14493 209 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 TSPAN9O75954 239 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 RECQL5O94762 991 aaPredicted RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 PIGRP01833 764 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 PORP16435 677 aaPredicted RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 FEN1P39748 380 aaKnown RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 RXRGP48443 463 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 CACNG1Q06432 222 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 CKAP4Q07065 602 aaKnown RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 GCKRQ14397 625 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 WTAPQ15007 396 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 MUC21Q5SSG8 566 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 C9orf129Q5T035 196 aaKnown RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 NAA16Q6N069 864 aaPredicted RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 DHRS11Q6UWP2 260 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 Q6ZVQ6 151 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 TAGAPQ8N103 731 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 SYT2Q8N9I0 419 aaPredicted RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms