RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 PCDHGA8Q9Y5G5 932 aa23.27■■□□□ 1.32
TMEM260-207ENST00000555497 TMEM229AB2RXF0 380 aa23.27■■□□□ 1.31
TMEM260-207ENST00000555497 LATO43561 262 aa23.27■■□□□ 1.31
TMEM260-207ENST00000555497 HOXB6P17509 224 aaKnown RBP23.27■■□□□ 1.31
TMEM260-207ENST00000555497 C5AR1P21730 350 aa23.27■■□□□ 1.31
TMEM260-207ENST00000555497 TIE1P35590 1138 aa23.27■■□□□ 1.31
TMEM260-207ENST00000555497 GALK1P51570 392 aa23.27■■□□□ 1.31
TMEM260-207ENST00000555497 CLCNKAP51800 687 aa23.27■■□□□ 1.31
TMEM260-207ENST00000555497 DYNC1I2Q13409 638 aaKnown RBP23.27■■□□□ 1.31
TMEM260-207ENST00000555497 OR2T5Q6IEZ7 315 aa23.27■■□□□ 1.31
TMEM260-207ENST00000555497 SHQ1Q6PI26 577 aaKnown RBP23.27■■□□□ 1.31
TMEM260-207ENST00000555497 THAP5Q7Z6K1 395 aa23.27■■□□□ 1.31
TMEM260-207ENST00000555497 OR2T29Q8NH02 315 aa23.27■■□□□ 1.31
TMEM260-207ENST00000555497 VCX3AQ9NNX9 186 aa23.27■■□□□ 1.31
TMEM260-207ENST00000555497 RSL24D1Q9UHA3 163 aaKnown RBP23.27■■□□□ 1.31
TMEM260-207ENST00000555497 PRR23AA6NEV1 266 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 K7EQS6 105 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 MITFO75030 526 aaPredicted RBP23.26■■□□□ 1.31
TMEM260-207ENST00000555497 AQP1P29972 269 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 TRIM23P36406 574 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 CTBSQ01459 385 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 TTC23Q5W5X9 447 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 CYP4Z1Q86W10 505 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 HIPK1Q86Z02 1210 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 ARL10Q8N8L6 244 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 ANKRD53Q8N9V6 530 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 TP53I13Q8NBR0 393 aaPredicted RBP23.26■■□□□ 1.31
TMEM260-207ENST00000555497 UBE2E3Q969T4 207 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 PPCDCQ96CD2 204 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 WDR26Q9H7D7 661 aa23.26■■□□□ 1.31
TMEM260-207ENST00000555497 ZNF282Q9UDV7 671 aaPredicted RBP23.26■■□□□ 1.31
TMEM260-207ENST00000555497 A0A1W2PPV9 198 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 KMOO15229 486 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 PTX3P26022 381 aaPredicted RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 KIR2DL1P43626 348 aaPredicted RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 HLCSP50747 726 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 CDK9P50750 372 aaKnown RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 PMS2P3Q13401 168 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 AGERQ15109 404 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 CYP2A13Q16696 494 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 IQCCQ4KMZ1 466 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 LPCAT2Q7L5N7 544 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 SLC9B2Q86UD5 537 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 C17orf64Q86WR6 236 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 ELSPBP1Q96BH3 223 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 TBC1D20Q96BZ9 403 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 SLC6A17Q9H1V8 727 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 SPASTQ9UBP0 616 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 RAPGEFL1Q9UHV5 662 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 DNMT3AQ9Y6K1 912 aaPredicted RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 ADH1BP00325 375 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 IL3P08700 152 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 LAMP2P13473 410 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 ETFAP13804 333 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 IL7RP16871 459 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 PPIBP23284 216 aaKnown RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 TPP2P29144 1249 aaPredicted RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 MAGEA10P43363 369 aaPredicted RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 CYP4F2P78329 520 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 CTU2Q2VPK5 515 aaKnown RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 TMEM184AQ6ZMB5 413 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 EGFL6Q8IUX8 553 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 C8orf59Q8N0T1 100 aaPredicted RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 SGCDQ92629 289 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 TMEM121BQ9BXQ6 578 aaPredicted RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 ING2Q9H160 280 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 LIN28AQ9H9Z2 209 aaKnown RBP23.25■■□□□ 1.31
TMEM260-207ENST00000555497 TM9SF3Q9HD45 589 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 ACSL6Q9UKU0 697 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 HEATR5BQ9P2D3 2071 aa23.25■■□□□ 1.31
TMEM260-207ENST00000555497 GPR37L1O60883 481 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 FKBP9O95302 570 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 FABP3P05413 133 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 ACP5P13686 325 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 ARHGAP19Q14CB8 494 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 ZBED5Q49AG3 693 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 FAM180BQ6P0A1 224 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 R3HCC1LQ7Z5L2 792 aaKnown RBP23.24■■□□□ 1.31
TMEM260-207ENST00000555497 GPR141Q7Z602 305 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 KRT78Q8N1N4 520 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 TPD52L3Q96J77 140 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 SLC35A5Q9BS91 424 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 SPATA9Q9BWV2 254 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 ZNF717Q9BY31 904 aaPredicted RBP23.24■■□□□ 1.31
TMEM260-207ENST00000555497 MKRN2Q9H000 416 aaKnown RBP23.24■■□□□ 1.31
TMEM260-207ENST00000555497 PLEKHM1Q9Y4G2 1056 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 FEZF1A0PJY2 475 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 RTCAO00442 366 aaKnown RBP23.24■■□□□ 1.31
TMEM260-207ENST00000555497 PLPP1O14494 284 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 CRATP43155 626 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 MLF2Q15773 248 aaPredicted RBP23.24■■□□□ 1.31
TMEM260-207ENST00000555497 LAIR2Q6ISS4 152 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 TMEM26Q6ZUK4 368 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 KCTD8Q6ZWB6 473 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 LINC01555Q8NAE3 123 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 ZNF555Q8NEP9 628 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 INSM2Q96T92 566 aaPredicted RBP23.24■■□□□ 1.31
TMEM260-207ENST00000555497 ATAD3AQ9NVI7 634 aa23.24■■□□□ 1.31
TMEM260-207ENST00000555497 DDX18Q9NVP1 670 aaKnown RBP23.24■■□□□ 1.31
TMEM260-207ENST00000555497 FAF1Q9UNN5 650 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms