RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 LYVE1Q9Y5Y7 322 aa16.42■□□□□ 0.22
PPP4R3A-208ENST00000555462 UNCXA6NJT0 531 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 CLCA1A8K7I4 914 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 TNNI3P19429 210 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 LHCGRP22888 699 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 TNFSF8P32971 234 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 CNR2P34972 360 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 LIPKQ5VXJ0 399 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 CRTC1Q6UUV9 634 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 DEFB128Q7Z7B8 93 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 TMPRSS11BQ86T26 416 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 RNF130Q86XS8 419 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 RBM45Q8IUH3 476 aaKnown RBP16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 UROC1Q96N76 676 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 FAM129BQ96TA1 746 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 NTMT1Q9BV86 223 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 LRFN2Q9ULH4 789 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 PRKAB1Q9Y478 270 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 PRUNE2Q8WUY3 3088 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 DYRK3O43781 588 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 GCM2O75603 506 aaPredicted RBP16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 CKMP06732 381 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 RPS19P39019 145 aaKnown RBP16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 SLC15A1P46059 708 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 HBA1P69905 142 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 PRKCZQ05513 592 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 KEAP1Q14145 624 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 NFE2L1Q14494 772 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 EIF3MQ7L2H7 374 aaKnown RBP16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 CMTM8Q8IZV2 173 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 C7orf34Q96L11 122 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 MMP27Q9H306 513 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 VPS29Q9UBQ0 182 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 CARD8Q9Y2G2 431 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 SYNDIG1LA6NDD5 238 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 EFCAB10A6NFE3 127 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 CCRL2O00421 344 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 ARHGAP33O14559 1287 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 GPX5O75715 221 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 PRKAR2AP13861 404 aaKnown RBP16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 ALDH9A1P49189 494 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 RPS13P62277 151 aaKnown RBP16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 RING1Q06587 406 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 TTLL9Q3SXZ7 439 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 LRIF1Q5T3J3 769 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 ZNF740Q8NDX6 193 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 TMEM246Q9BRR3 403 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 MAGIXQ9H6Y5 334 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 TRPS1Q9UHF7 1281 aa16.41■□□□□ 0.22
PPP4R3A-208ENST00000555462 PRAMEF33A0A0G2JMD5 474 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 PRRG1O14668 218 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 PRAMEF10O60809 474 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 SPAM1P38567 509 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 MAGEA2P43356 314 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 HOXC5Q00444 222 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 PTGES3Q15185 160 aaKnown RBP16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 TBRG1Q3YBR2 411 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 Q6ZVL8 140 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 CBLL1Q75N03 491 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 SLC46A3Q7Z3Q1 461 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 C11orf96Q7Z7L8 435 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 TP53I13Q8NBR0 393 aaPredicted RBP16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 DEPDC7Q96QD5 511 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 PRR14Q9BWN1 585 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 RANGRFQ9HD47 186 aaPredicted RBP16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 ZNF221Q9UK13 617 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 PCDHB7Q9Y5E2 793 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 CFAP20Q9Y6A4 193 aaKnown RBP16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 TRAV19A0A0A6YYK7 116 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 A0A1B0GVC2 190 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 A6NIN4 97 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 WASHC1A8K0Z3 465 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 RTCAO00442 366 aaKnown RBP16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 CDK1P06493 297 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 PDHA2P29803 388 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 CHI3L1P36222 383 aaPredicted RBP16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 TLE2Q04725 743 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 RGNQ15493 299 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 TCEA2Q15560 299 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 LYPD8Q6UX82 237 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 WASH2PQ6VEQ5 465 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 CHST14Q8NCH0 376 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 OR9Q1Q8NGQ5 310 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 UPF1Q92900 1129 aaKnown RBP eCLIP16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 CLSTN3Q9BQT9 956 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 ABCB8Q9NUT2 735 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 WBP11Q9Y2W2 641 aaKnown RBP16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 CACNA1CQ13936 2221 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 VWA8A3KMH1 1905 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 ANKRD34BA5PLL1 514 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 TSC22D2O75157 780 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 NTN1O95631 604 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 CERS6Q6ZMG9 384 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 CACUL1Q86Y37 369 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 SYT14Q8NB59 555 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 MYDGFQ969H8 173 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 PDLIM5Q96HC4 596 aaKnown RBP16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 GFM1Q96RP9 751 aaKnown RBP16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 BRD9Q9H8M2 597 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms