RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ATAD3AQ9NVI7 634 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 MIS18AQ9NYP9 233 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 MEIOCA2RUB1 952 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 PRR23AA6NEV1 266 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 NKX6-3A6NJ46 265 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 PRR23D1E9PI22 279 aaPredicted RBP4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 H0YIG0 161 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 ZNF195O14628 629 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 KERAO60938 352 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 MT-ND2P03891 347 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 PRR23D2P0DMB1 279 aaPredicted RBP4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 HLA-FP30511 346 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 SRD5A2P31213 254 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 NR0B1P51843 470 aaKnown RBP4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 ADARP55265 1226 aaKnown RBP4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 CSNK2BP67870 215 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 FKBP1BP68106 108 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 TRA2AQ13595 282 aaKnown RBP eCLIP4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 TAB1Q15750 504 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 DUSP5Q16690 384 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 ATP1A1-AS1Q5TC04 95 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 PWWP2BQ6NUJ5 590 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 ARHGAP11AQ6P4F7 1023 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 SIGLEC15Q6ZMC9 328 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 Q6ZSR9 355 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 TRMT11Q7Z4G4 463 aaKnown RBP4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 PRSS42Q7Z5A4 293 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 SMYD1Q8NB12 490 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 MGARPQ8TDB4 240 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 CHURC1Q8WUH1 139 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 CASP10Q92851 521 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 SNX21Q969T3 373 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 C5orf30Q96GV9 206 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 ZNF696Q9H7X3 374 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 SATB2Q9UPW6 733 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 GAB2Q9UQC2 676 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 PPP1R3CQ9UQK1 317 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 TMED7Q9Y3B3 224 aa4.72□□□□□ -1.65
CKS1BP1-201ENST00000555221 A0A087WZ39 114 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 C15orf61A6NNL5 157 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 IGKV3-20P01619 116 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 IGLV1-44P01699 117 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 CPA3P15088 417 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 CTNNA2P26232 953 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 SOX3P41225 446 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 SLC1A3P43003 542 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 TSFMP43897 325 aaKnown RBP4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 CLCN4P51793 760 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 XGP55808 180 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 AP1B1Q10567 949 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 CDC37Q16543 378 aaPredicted RBP4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 TMEM30BQ3MIR4 351 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 ADAMTSL4-AS1Q5T5F5 129 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 TCEAL6Q6IPX3 200 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 SLC27A4Q6P1M0 643 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 ASPGQ86U10 573 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 TMEM126BQ8IUX1 230 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 TEX26Q8N6G2 289 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 SAP25Q8TEE9 199 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 SEPT8Q92599 483 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 ULK4Q96C45 1275 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 OMA1Q96E52 524 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 EEF2KMTQ96G04 330 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 C2orf48Q96LS8 159 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 NEDD4LQ96PU5 975 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 ATP6V0BQ99437 205 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 RBM4Q9BWF3 364 aaKnown RBP4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 CLEC7AQ9BXN2 247 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 ACPTQ9BZG2 426 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 MAGEF1Q9HAY2 307 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZNF510Q9Y2H8 683 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 WDR81Q562E7 1941 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 RNF123Q5XPI4 1314 aa4.71□□□□□ -1.66
CKS1BP1-201ENST00000555221 A0A1W2PR80 420 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 SURF4O15260 269 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 LINC01565O15544 149 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 EDIL3O43854 480 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 OLFM2O95897 454 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 GAS8O95995 478 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 THEGLP0DJG4 465 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 STMN1P16949 149 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 ATP6V1E1P36543 226 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 LCP2Q13094 533 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 LASP1Q14847 261 aaKnown RBP4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 HLA-BQ31612 363 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 KRTAP24-1Q3LI83 254 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 FAM106AQ4KMX7 169 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 WLSQ5T9L3 541 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 CHMP1BQ7LBR1 199 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 C5orf24Q7Z6I8 188 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 LAX1Q8IWV1 398 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 ST7LQ8TDW4 575 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 GGHQ92820 318 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZNF486Q96H40 463 aaPredicted RBP4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 LURAP1Q96LR2 239 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 KRT12Q99456 494 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 LITAFQ99732 161 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 ASCL2Q99929 193 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 LRRC2Q9BYS8 371 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms