RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 GDPGP1Q6ZNW5 385 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 KANSL1Q7Z3B3 1105 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 GPR142Q7Z601 462 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 NETO2Q8NC67 525 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 SLC25A46Q96AG3 418 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 LRRC46Q96FV0 321 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 FAM167AQ96KS9 214 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 ZNF285Q96NJ3 590 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 MSTO1Q9BUK6 570 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 NKX6-2Q9C056 277 aaPredicted RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 GAREM1Q9H706 876 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 CDHR5Q9HBB8 845 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 MID1IP1Q9NPA3 183 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 EXOSC4Q9NPD3 245 aaKnown RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 SLC22A11Q9NSA0 550 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 MYEF2Q9P2K5 600 aaKnown RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 GPR160Q9UJ42 338 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 POMT2Q9UKY4 750 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 STUB1Q9UNE7 303 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 SLC6A5Q9Y345 797 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 ANKRD36A6QL64 1941 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 SCAMP1O15126 338 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 CXCL14O95715 111 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 KLK3P07288 261 aaPredicted RBP9.21□□□□□ -0.93
SIX4-202ENST00000554079 LTA4HP09960 611 aaKnown RBP9.21□□□□□ -0.93
SIX4-202ENST00000554079 GABRB1P18505 474 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 FPR1P21462 350 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 GGT2P36268 569 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 PBX3P40426 434 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 RFC3P40938 356 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 EPHA4P54764 986 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 OSTNP61366 133 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 RPL6Q02878 288 aaKnown RBP9.21□□□□□ -0.93
SIX4-202ENST00000554079 ST3GAL4Q11206 333 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 OPCMLQ14982 345 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 TEAD4Q15561 434 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 ERFEQ4G0M1 354 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 PLA1AQ53H76 456 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 TCTE1Q5JU00 501 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 SYPL2Q5VXT5 272 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 BICRALQ6AI39 1079 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 HSDL2Q6YN16 418 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 USP53Q70EK8 1073 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 TRMT11Q7Z4G4 463 aaKnown RBP9.21□□□□□ -0.93
SIX4-202ENST00000554079 RAB44Q7Z6P3 723 aaPredicted RBP9.21□□□□□ -0.93
SIX4-202ENST00000554079 ZDHHC21Q8IVQ6 265 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 C4orf19Q8IY42 314 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 ADGRF3Q8IZF5 1079 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 Q8N402 240 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 DNAAF3Q8N9W5 541 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 GPR156Q8NFN8 814 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 GOT1L1Q8NHS2 421 aaPredicted RBP9.21□□□□□ -0.93
SIX4-202ENST00000554079 WDR20Q8TBZ3 569 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 RAB7BQ96AH8 199 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 MTERF3Q96E29 417 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 SLC38A3Q99624 504 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 CDCA4Q9BXL8 241 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 ERVK-6Q9BXR3 956 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 IKZF5Q9H5V7 419 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 NIT2Q9NQR4 276 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 DLL4Q9NR61 685 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 RAD18Q9NS91 495 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 SH3BP4Q9P0V3 963 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 NYAP2Q9P242 653 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 MIOXQ9UGB7 285 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 RPS6KA6Q9UK32 745 aa9.21□□□□□ -0.93
SIX4-202ENST00000554079 MEIKINA0A087WXM9 373 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 A0A1B0GVI7 797 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 ELOVL7A1L3X0 281 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 LCHNA4D1U4 455 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 CREG1O75629 220 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 MLYCDO95822 493 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 GLUD1P00367 558 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 SERPINA1P01009 418 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 GNRH1P01148 92 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 S100A8P05109 93 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 HOXB6P17509 224 aaKnown RBP9.21□□□□□ -0.94
SIX4-202ENST00000554079 TPH1P17752 444 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 RHCEP18577 417 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 POU3F2P20265 443 aaPredicted RBP9.21□□□□□ -0.94
SIX4-202ENST00000554079 ITPKAP23677 461 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 GPX4P36969 197 aaPredicted RBP9.21□□□□□ -0.94
SIX4-202ENST00000554079 SLC1A2P43004 574 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 PTGER2P43116 358 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 POU3F4P49335 361 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 FOXK2Q01167 660 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 POU4F1Q01851 419 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 DGKZQ13574 1117 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 EMC2Q15006 297 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 ATP6AP1LQ52LC2 224 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 PRAMEF19Q5SWL8 479 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 BCL2L15Q5TBC7 163 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 DDI2Q5TDH0 399 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 IL31Q6EBC2 164 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 OR2T5Q6IEZ7 315 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 ESRP1Q6NXG1 681 aaKnown RBP9.21□□□□□ -0.94
SIX4-202ENST00000554079 C3P1Q6ZMU1 363 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 Q6ZPB1 254 aaPredicted RBP9.21□□□□□ -0.94
SIX4-202ENST00000554079 KRT74Q7RTS7 529 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 ZER1Q7Z7L7 766 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms