RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 XKR7Q5GH72 579 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 FHL5Q5TD97 284 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 FAM91A1Q658Y4 838 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 ICE2Q659A1 982 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 ARMC6Q6NXE6 501 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 OGFOD3Q6PK18 319 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 TMEM26Q6ZUK4 368 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 TRIM46Q7Z4K8 759 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 SPATA19Q7Z5L4 167 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 CLNKQ7Z7G1 428 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 PARP9Q8IXQ6 854 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 ABHD11Q8NFV4 315 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 CCDC3Q9BQI4 270 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 ACAT2Q9BWD1 397 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 TUBB1Q9H4B7 451 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 PRM3Q9NNZ6 103 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 NMRK1Q9NWW6 199 aa13.85□□□□□ -0.19
SHMT2-208ENST00000553868 NF1P21359 2839 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 CELSR1Q9NYQ6 3014 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 C2orf74A8MZ97 194 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 UBDO15205 165 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 NVLO15381 856 aaKnown RBP13.84□□□□□ -0.19
SHMT2-208ENST00000553868 GRNP28799 593 aaKnown RBP13.84□□□□□ -0.19
SHMT2-208ENST00000553868 GRK3P35626 688 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 ETV5P41161 510 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 HTR6P50406 440 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 STX1BP61266 288 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 MAD2L1Q13257 205 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-208ENST00000553868 ABRAXAS2Q15018 415 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 NR6A1Q15406 480 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 SF1Q15637 639 aaKnown RBP13.84□□□□□ -0.19
SHMT2-208ENST00000553868 C14orf28Q4W4Y0 310 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 SGO1Q5FBB7 561 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 CATSPEREQ5SY80 951 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 OGFOD2Q6N063 350 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 LARP4Q71RC2 724 aaKnown RBP eCLIP13.84□□□□□ -0.19
SHMT2-208ENST00000553868 YTHDF3Q7Z739 585 aaKnown RBP13.84□□□□□ -0.19
SHMT2-208ENST00000553868 OOSP2Q86WS3 158 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 DTX1Q86Y01 620 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 FITM2Q8N6M3 262 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 OR2A1Q8NGT9 310 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 C9orf43Q8TAL5 461 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-208ENST00000553868 PATE1Q8WXA2 126 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 NMUR2Q9GZQ4 415 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 MYLK2Q9H1R3 596 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 NT5DC2Q9H857 520 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 AKTIPQ9H8T0 292 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 BRF2Q9HAW0 419 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 MRPS30Q9NP92 439 aaKnown RBP13.84□□□□□ -0.19
SHMT2-208ENST00000553868 SAR1AQ9NR31 198 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 TMEM184CQ9NVA4 438 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 SNX7Q9UNH6 387 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 TSC22D4Q9Y3Q8 395 aa13.84□□□□□ -0.19
SHMT2-208ENST00000553868 SDK2Q58EX2 2172 aa13.83□□□□□ -0.19
SHMT2-208ENST00000553868 ANKRD12Q6UB98 2062 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 ATP6AP2A0A1C7CYW4 349 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 OR6C74A6NCV1 312 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 LILRA5A6NI73 299 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 PRICKLE3O43900 615 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-208ENST00000553868 PRAMEF4O60810 478 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 ATP6AP2O75787 350 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 RSL1D1O76021 490 aaKnown RBP13.83□□□□□ -0.2
SHMT2-208ENST00000553868 PDYNP01213 254 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 JMJD7P0C870 316 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 PCNAP12004 261 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 VARSP26640 1264 aaKnown RBP13.83□□□□□ -0.2
SHMT2-208ENST00000553868 GSTM2P28161 218 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 ATP4BP51164 291 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 SQLEQ14534 574 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 GSTA3Q16772 222 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 TCHHL1Q5QJ38 904 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-208ENST00000553868 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-208ENST00000553868 PRAMEF9Q5VWM5 478 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 SCIMPQ6UWF3 145 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 TMIGD1Q6UXZ0 262 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 CHSY3Q70JA7 882 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 C17orf82Q86X59 251 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-208ENST00000553868 SLC35F3Q8IY50 421 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 LAS2Q8IYD9 372 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 ADGRF3Q8IZF5 1079 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 CPSF7Q8N684 471 aaKnown RBP13.83□□□□□ -0.2
SHMT2-208ENST00000553868 LMNTD1Q8N9Z9 388 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 TTLQ8NG68 377 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 OR2L3Q8NG85 312 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 METTL2AQ96IZ6 378 aaKnown RBP13.83□□□□□ -0.2
SHMT2-208ENST00000553868 C3orf30Q96M34 536 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 ACTR10Q9NZ32 417 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 TUBD1Q9UJT1 453 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 CAPN7Q9Y6W3 813 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 DNHD1Q96M86 4753 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 CSMD2Q7Z408 3487 aa13.83□□□□□ -0.2
SHMT2-208ENST00000553868 GSAPA4D1B5 854 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 RHPN2P1A8MT19 583 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 NPIPB8E9PQR5 432 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 FOXE1O00358 373 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-208ENST00000553868 NTN3O00634 580 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-208ENST00000553868 ZW10O43264 779 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 HNRNPCL1O60812 293 aaKnown RBP13.82□□□□□ -0.2
SHMT2-208ENST00000553868 PEX11AO75192 247 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 ATP5HO75947 161 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms