RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 HSD11B2P80365 405 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 GBX1Q14549 363 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 ACSBG2Q5FVE4 666 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 OGFOD2Q6N063 350 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 SNX32Q86XE0 403 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 D2HGDHQ8N465 521 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 CLDN19Q8N6F1 224 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 EFCAB3Q8N7B9 438 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 POU5F2Q8N7G0 328 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 GALNT11Q8NCW6 608 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 LKAAEAR1Q8TD35 194 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 ZNF514Q96K75 400 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-209ENST00000553659 HIST1H2AHQ96KK5 128 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 PPP1R36Q96LQ0 422 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 HIST1H2AJQ99878 128 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 EGFL8Q99944 293 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 H2AFJQ9BTM1 129 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 SLC25A23Q9BV35 468 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 SEMA4BQ9NPR2 832 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-209ENST00000553659 WWOXQ9NZC7 414 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 NOP53Q9NZM5 478 aaKnown RBP15.34■□□□□ 0.05
ACTN1-209ENST00000553659 PTBP2Q9UKA9 531 aaKnown RBP15.34■□□□□ 0.05
ACTN1-209ENST00000553659 PSMD13Q9UNM6 376 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 FARSAQ9Y285 508 aaKnown RBP15.34■□□□□ 0.05
ACTN1-209ENST00000553659 PCDHGA9Q9Y5G4 932 aaKnown RBP15.34■□□□□ 0.05
ACTN1-209ENST00000553659 USP9YO00507 2555 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-209ENST00000553659 LOC100653049A0A140TA62 436 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 TLCD2A6NGC4 264 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 NCF1BA6NI72 391 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-209ENST00000553659 A8MUI8 341 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 NCF1CA8MVU1 366 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-209ENST00000553659 PSMD12O00232 456 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-209ENST00000553659 KRT34O76011 436 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 NCF1P14598 390 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-209ENST00000553659 IDO1P14902 403 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 ITGAXP20702 1163 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 CYP2A7P20853 494 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 UQCRFS1P47985 274 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 HNMTP50135 292 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 PGDP52209 483 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 CTSCP53634 463 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 AP1S2P56377 157 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 RPS18P62269 152 aaKnown RBP15.33■□□□□ 0.04
ACTN1-209ENST00000553659 ART3Q13508 389 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 FASTKQ14296 549 aaKnown RBP15.33■□□□□ 0.04
ACTN1-209ENST00000553659 NFE2L1Q14494 772 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 PLCL1Q15111 1095 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 FHL5Q5TD97 284 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 METRNLQ641Q3 311 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 CLEC6AQ6EIG7 209 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 CAPRIN2Q6IMN6 1127 aaKnown RBP15.33■□□□□ 0.04
ACTN1-209ENST00000553659 TMEM220Q6QAJ8 160 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 CYHR1Q6ZMK1 362 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 FAM83HQ6ZRV2 1179 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-209ENST00000553659 DDIASQ8IXT1 998 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 PGAM4Q8N0Y7 254 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 CPT1CQ8TCG5 803 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 TSPEARQ8WU66 669 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 MRPL1Q9BYD6 325 aaKnown RBP15.33■□□□□ 0.04
ACTN1-209ENST00000553659 HRASLS2Q9NWW9 162 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 ANGPTL3Q9Y5C1 460 aa15.33■□□□□ 0.04
ACTN1-209ENST00000553659 SEC16AO15027 2179 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 OR5K3A6NET4 321 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 OR2AG2A6NM03 316 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 PIP5K1BO14986 540 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 CPNE3O75131 537 aaKnown RBP15.32■□□□□ 0.04
ACTN1-209ENST00000553659 PEX11AO75192 247 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 FKBP6O75344 327 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 WDR47O94967 919 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 AGFG2O95081 481 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 MATN4O95460 622 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 MTHFD1P11586 935 aaKnown RBP15.32■□□□□ 0.04
ACTN1-209ENST00000553659 GNLYP22749 145 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 CA5AP35218 305 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 ACTR3P61158 418 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 SLC25A3Q00325 362 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 GTF2H2Q13888 395 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 SMU1Q2TAY7 513 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 COQ5Q5HYK3 327 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 TMEM198Q66K66 360 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 GTF2H2CQ6P1K8 395 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 PGM2L1Q6PCE3 622 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 AAGABQ6PD74 315 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 HACD2Q6Y1H2 254 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 ZNF517Q6ZMY9 492 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-209ENST00000553659 RPS27LQ71UM5 84 aaKnown RBP15.32■□□□□ 0.04
ACTN1-209ENST00000553659 LRRC70Q7Z2Q7 622 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 OR8K5Q8NH50 307 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 ZFPM2Q8WW38 1151 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 ASZ1Q8WWH4 475 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 ATP6V1E2Q96A05 226 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 NSUN5Q96P11 429 aaKnown RBP15.32■□□□□ 0.04
ACTN1-209ENST00000553659 CD244Q9BZW8 370 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 ING2Q9H160 280 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 AKTIPQ9H8T0 292 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 TNFRSF12AQ9NP84 129 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 STOML1Q9UBI4 398 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 OPTCQ9UBM4 332 aa15.32■□□□□ 0.04
ACTN1-209ENST00000553659 SPTBN1Q01082 2364 aaKnown RBP15.32■□□□□ 0.04
ACTN1-209ENST00000553659 CCDC88CQ9P219 2028 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms