RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 DBX2Q6ZNG2 339 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 SPRED1Q7Z699 444 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 RIMKLAQ8IXN7 391 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 KRTCAP2Q8N6L1 136 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 RBM15BQ8NDT2 890 aaKnown RBP13.11□□□□□ -0.31
APEX1-205ENST00000553555 NUDT8Q8WV74 236 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 KLHL29Q96CT2 875 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 RCN3Q96D15 328 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 MS4A6EQ96DS6 147 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 SPDL1Q96EA4 605 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 BTBD10Q9BSF8 475 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 SORBS1Q9BX66 1292 aaKnown RBP13.11□□□□□ -0.31
APEX1-205ENST00000553555 SLC6A16Q9GZN6 736 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 C1orf21Q9H246 121 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 LRMDAQ9H2I8 198 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 EFCAB1Q9HAE3 211 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 FAM60AQ9NP50 221 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 LOC105369274A0A096LPK9 316 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 LOC102723532A0A0G2JNH3 316 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 GNG14A0A1W2PPG7 69 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 LNP1A1A4G5 178 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 DYTNA2CJ06 578 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 H0YGG7 62 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 RTCAO00442 366 aaKnown RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 AIM2O14862 343 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 SH3BP5O60239 455 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 C9P02748 559 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 CAPN3P20807 821 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 TPP2P29144 1249 aaPredicted RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 CPOXP36551 454 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 ASMTP46597 345 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 ARFIP1P53367 373 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 CORO7P57737 925 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 ARF3P61204 181 aaPredicted RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 STXBP1P61764 594 aaKnown RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 MXRA7P84157 204 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 ACTN3Q08043 901 aaPredicted RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 TCF15Q12870 199 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 SQSTM1Q13501 440 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 RCAN2Q14206 197 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 PROX2Q3B8N5 592 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 VPS26BQ4G0F5 336 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 PERM1Q5SV97 790 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 OR4C11Q6IEV9 310 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 RIPOR1Q6ZS17 1223 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 USP53Q70EK8 1073 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 PAGE2Q7Z2X7 111 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 PLXDC1Q8IUK5 500 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 OR4N4Q8N0Y3 316 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 DNAJC22Q8N4W6 341 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 CAMKVQ8NCB2 501 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.1□□□□□ -0.311e-27■■□□□ 13.1
APEX1-205ENST00000553555 TCTN2Q96GX1 697 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 QRFPRQ96P65 431 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 ZBTB18Q99592 522 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 NPAS2Q99743 824 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 LRFN3Q9BTN0 628 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 CLMPQ9H6B4 373 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 LHX9Q9NQ69 397 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 DNAAF2Q9NVR5 837 aaKnown RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.1□□□□□ -0.31
APEX1-205ENST00000553555 ADAM29Q9UKF5 820 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 BTBD3Q9Y2F9 522 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 NDUFAF1Q9Y375 327 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 PCDHGB2Q9Y5G2 931 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 SCN2AQ99250 2005 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 IGHV5-51A0A0C4DH38 117 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 A0A1W2PP18 115 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 CCDC154A6NI56 674 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 BBIP1A8MTZ0 92 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 GYG2O15488 501 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 PRMT3O60678 531 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 EEDO75530 441 aaKnown RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 DNAJC8O75937 253 aaPredicted RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 GBAP04062 536 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 SLC35G6P0C7Q6 338 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 ZNF806P0C7X5 589 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 CKMT1AP12532 417 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 PLA2G16P53816 162 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 CLNS1AP54105 237 aaKnown RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 C21orf58P58505 322 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 RGS1Q08116 209 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 ZNF763Q0D2J5 394 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 MMEL1Q495T6 779 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 ZC3H12BQ5HYM0 836 aaKnown RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 CCNYL2Q5T2Q4 361 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 REP15Q6BDI9 236 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 ABHD17CQ6PCB6 329 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 WDR74Q6RFH5 385 aaPredicted RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 CARFQ8N187 725 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 KCT2Q8NC54 265 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 SRFBP1Q8NEF9 429 aaKnown RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 PRSS33Q8NF86 280 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 OR2L5Q8NG80 312 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 C16orf78Q8WTQ4 265 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 NAT6Q93015 286 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 RERGQ96A58 199 aaPredicted RBP13.1□□□□□ -0.31
APEX1-205ENST00000553555 PRRX2Q99811 253 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 CHRNA10Q9GZZ6 450 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 DDX31Q9H8H2 851 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms