RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SERPINA12Q8IW75 414 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 LSMEM2Q8N112 164 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 CLEC1AQ8NC01 280 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 CD99L2Q8TCZ2 262 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 NKX3-1Q99801 234 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-210ENST00000553455 NACAP1Q9BZK3 213 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 DPEP2Q9H4A9 486 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 ZNF696Q9H7X3 374 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 TMOD3Q9NYL9 352 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 APPL1Q9UKG1 709 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 SATB2Q9UPW6 733 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 NCKAP1Q9Y2A7 1128 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 WDR37Q9Y2I8 494 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 ANGPTL3Q9Y5C1 460 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 TEX264Q9Y6I9 313 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 A0A087WZ39 114 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 GTPBP10A4D1E9 387 aaKnown RBP4.49□□□□□ -1.69
SYNE2-210ENST00000553455 GLTPD2A6NH11 291 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 SERINC4A6NH21 518 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 ZNF732B4DXR9 585 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 SLCO1B7G3V0H7 640 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 CACNB4O00305 520 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-210ENST00000553455 RTCAO00442 366 aaKnown RBP4.49□□□□□ -1.69
SYNE2-210ENST00000553455 THEGLP0DJG4 465 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 CLCN4P51793 760 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 XGP55808 180 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 CDH18Q13634 790 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 HNRNPDQ14103 355 aaKnown RBP4.49□□□□□ -1.69
SYNE2-210ENST00000553455 KLHL22Q53GT1 634 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 ADAMTSL4-AS1Q5T5F5 129 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 PWWP2BQ6NUJ5 590 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 BHLHB9Q6PI77 547 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 TEX26Q8N6G2 289 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 TMEM99Q8N816 258 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 TCEANCQ8N8B7 351 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 ZNF486Q96H40 463 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-210ENST00000553455 LRR1Q96L50 414 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 LITAFQ99732 161 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 NYXQ9GZU5 481 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 ZDHHC6Q9H6R6 413 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 MAGEF1Q9HAY2 307 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 INTS10Q9NVR2 710 aaKnown RBP4.49□□□□□ -1.69
SYNE2-210ENST00000553455 AKAP7Q9P0M2 348 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-210ENST00000553455 MAD2L2Q9UI95 211 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 ZNF510Q9Y2H8 683 aa4.49□□□□□ -1.69
SYNE2-210ENST00000553455 NEDD4P46934 1319 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 NPHP3Q7Z494 1330 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 TMEM129A0AVI4 362 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 P4HA1P13674 534 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 AADACP22760 399 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 SMSP52788 366 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 PAX9P55771 341 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 ARF5P84085 180 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 SLC3A1Q07837 685 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 CBX3Q13185 183 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 ITGA9Q13797 1035 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 GRB14Q14449 540 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 TAB1Q15750 504 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 C17orf107Q6ZR85 190 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 C15orf52Q6ZUT6 534 aaKnown RBP4.48□□□□□ -1.69
SYNE2-210ENST00000553455 TRMT11Q7Z4G4 463 aaKnown RBP4.48□□□□□ -1.69
SYNE2-210ENST00000553455 HOGA1Q86XE5 327 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 TMEM126BQ8IUX1 230 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 PEX5LQ8IYB4 626 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 RAB42Q8N4Z0 105 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 RTL3Q8N8U3 475 aaKnown RBP4.48□□□□□ -1.69
SYNE2-210ENST00000553455 DDHD1Q8NEL9 900 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 PSMA8Q8TAA3 256 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 DNASE2BQ8WZ79 361 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 SEPT8Q92599 483 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 GGHQ92820 318 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 CASP10Q92851 521 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 ATP6V0A1Q93050 837 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 GMPPAQ96IJ6 420 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-210ENST00000553455 LURAP1Q96LR2 239 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 DDX50Q9BQ39 737 aaKnown RBP4.48□□□□□ -1.69
SYNE2-210ENST00000553455 TSPYL1Q9H0U9 437 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 PRMT8Q9NR22 394 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-210ENST00000553455 POLKQ9UBT6 870 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 POMT2Q9UKY4 750 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 KCNK6Q9Y257 313 aa4.48□□□□□ -1.69
SYNE2-210ENST00000553455 FOXA2Q9Y261 457 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-210ENST00000553455 MEIOCA2RUB1 952 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 CCDC162PA2VCL2 907 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 PRR23AA6NEV1 266 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 C15orf61A6NNL5 157 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 SRRM4A7MD48 611 aaKnown RBP4.47□□□□□ -1.69
SYNE2-210ENST00000553455 M0R296 226 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 IKBKBO14920 756 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 CLN5O75503 358 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 GRAP2O75791 330 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 PRKAR1AP10644 381 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 ITGB6P18564 788 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 GJB2P29033 226 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 NR0B1P51843 470 aaKnown RBP4.47□□□□□ -1.69
SYNE2-210ENST00000553455 GPR50Q13585 617 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 LRRC37A5PQ49AS3 106 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 FGD3Q5JSP0 725 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 SLC27A4Q6P1M0 643 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 TATDN1Q6P1N9 297 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms