RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 NXPE2Q96DL1 559 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 LMLNQ96KR4 655 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 TSGA13Q96PP4 275 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 LRRC2Q9BYS8 371 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 BICC1Q9H694 974 aaKnown RBP4.52□□□□□ -1.69
SCFD1-209ENST00000553280 EGLN3Q9H6Z9 239 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 LIN28AQ9H9Z2 209 aaKnown RBP4.52□□□□□ -1.69
SCFD1-209ENST00000553280 PANK4Q9NVE7 773 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 PSORS1C1Q9UIG5 152 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 PILRBQ9UKJ0 227 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 PRDM4Q9UKN5 801 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 BLOC1S6Q9UL45 172 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 NCKAP1Q9Y2A7 1128 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 PLEKHA6Q9Y2H5 1048 aa4.52□□□□□ -1.69
SCFD1-209ENST00000553280 UBE4BO95155 1302 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 DENND3A2RUS2 1198 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 FPGTO14772 594 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 SSX5O60225 188 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 GUCA1CO95843 209 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 TGFAP01135 160 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 EDN1P05305 212 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 T-ENOLP0DO92 83 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 PLA2G2AP14555 144 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 MARK3P27448 753 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 NSFP46459 744 aaKnown RBP4.51□□□□□ -1.69
SCFD1-209ENST00000553280 CAMLGP49069 296 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 GMFBP60983 142 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 GIT2Q14161 759 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 STX1AQ16623 288 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 EPC2Q52LR7 807 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 HERC4Q5GLZ8 1057 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-209ENST00000553280 WDR38Q5JTN6 314 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 PRAMEF7Q5VXH5 474 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 ISLR2Q6UXK2 745 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 WDR88Q6ZMY6 472 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 C9orf139Q6ZV77 190 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 SLC16A9Q7RTY1 509 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 MARVELD2Q8N4S9 558 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 ARL6IP6Q8N6S5 226 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 RNF149Q8NC42 400 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 SLC37A3Q8NCC5 494 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 ZBTB44Q8NCP5 570 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 OR4A16Q8NH70 328 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 HPSE2Q8WWQ2 592 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 C14orf79Q96F83 325 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 SAMD8Q96LT4 415 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 NTMT1Q9BV86 223 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 THAP2Q9H0W7 228 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 GPN1Q9HCN4 374 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-209ENST00000553280 PPANQ9NQ55 473 aaKnown RBP4.51□□□□□ -1.69
SCFD1-209ENST00000553280 INTS9Q9NV88 658 aaKnown RBP4.51□□□□□ -1.69
SCFD1-209ENST00000553280 TBC1D13Q9NVG8 400 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 TMOD3Q9NYL9 352 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 ERVK-19Q9WJR5 959 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 NUDCQ9Y266 331 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 PCDHGB1Q9Y5G3 927 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 SPATA31D1Q6ZQQ2 1576 aa4.51□□□□□ -1.69
SCFD1-209ENST00000553280 KIAA1217Q5T5P2 1943 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 FAM205AQ6ZU69 1335 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 KPNA7A9QM74 516 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 SNURFLB1AK76 121 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 ZNF732B4DXR9 585 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 K7EPI3 171 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 NDC80O14777 642 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 SYT7O43581 403 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 ATP6V1G1O75348 118 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 STBD1O95210 358 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 CAVIN2O95810 425 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 EPOP01588 193 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 MT-ND2P03891 347 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 ATP1A1P05023 1023 aaKnown RBP4.5□□□□□ -1.69
SCFD1-209ENST00000553280 CHRNGP07510 517 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 NUDT17P0C025 328 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 SNHG28P0DPA3 235 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 KIF5BP33176 963 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 FOXG1P55316 489 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-209ENST00000553280 CDR2Q01850 454 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 GABPAQ06546 454 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 TRIM29Q14134 588 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 IZUMO4Q1ZYL8 232 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 OR4C11Q6IEV9 310 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 SLC27A4Q6P1M0 643 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 C15orf52Q6ZUT6 534 aaKnown RBP4.5□□□□□ -1.69
SCFD1-209ENST00000553280 CYP4V2Q6ZWL3 525 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-209ENST00000553280 SLC24A5Q71RS6 500 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 ZC3H3Q8IXZ2 948 aaKnown RBP4.5□□□□□ -1.69
SCFD1-209ENST00000553280 CIARTQ8N365 385 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-209ENST00000553280 ZNF843Q8N446 348 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 KLHDC9Q8NEP7 349 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 KBTBD8Q8NFY9 601 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 UBTD2Q8WUN7 234 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 FCAMRQ8WWV6 532 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 ESAMQ96AP7 390 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 ALG14Q96F25 216 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 THOC3Q96J01 351 aaKnown RBP4.5□□□□□ -1.69
SCFD1-209ENST00000553280 LPAR4Q99677 370 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 SPAG8Q99932 426 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-209ENST00000553280 PITPNM3Q9BZ71 974 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 ABCG4Q9H172 646 aa4.5□□□□□ -1.69
SCFD1-209ENST00000553280 HIPK2Q9H2X6 1198 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms