RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 MTNR1BP49286 362 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 KPNA2P52292 529 aaKnown RBP5.56□□□□□ -1.52
SCAF11-213ENST00000550629 LIMK1P53667 647 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 BMPR2Q13873 1038 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 NFE2L1Q14494 772 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 TNFAIP8L3Q5GJ75 292 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 CDKL4Q5MAI5 379 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 CEP85LQ5SZL2 805 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 TCEAL6Q6IPX3 200 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 KLC3Q6P597 504 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 IYDQ6PHW0 289 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 SLC30A9Q6PML9 568 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 FAM180AQ6UWF9 173 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 RAPH1Q70E73 1250 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 MRGPRGQ86SM5 289 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 TRABD2AQ86V40 505 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 PIM3Q86V86 326 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 RASGRP3Q8IV61 690 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 KRT222Q8N1A0 295 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 MYO1HQ8N1T3 1032 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 SFRP1Q8N474 314 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 ARL10Q8N8L6 244 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 FAM46DQ8NEK8 389 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 ACVR1CQ8NER5 493 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 OR6C4Q8NGE1 309 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 RHEBL1Q8TAI7 183 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 PROKR1Q8TCW9 393 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 LKAAEAR1Q8TD35 194 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 MAGEC3Q8TD91 643 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 EEF1AKMT1Q8WVE0 214 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 HOXB13Q92826 284 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-213ENST00000550629 TCEAL3Q969E4 200 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 SH3KBP1Q96B97 665 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 ZG16BQ96DA0 208 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 LINGO1Q96FE5 620 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 ATXN7L3BQ96GX2 97 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 FOPNLQ96NB1 174 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 ZIM3Q96PE6 472 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 EDEM2Q9BV94 578 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 GTPBP2Q9BX10 602 aaKnown RBP5.56□□□□□ -1.52
SCAF11-213ENST00000550629 TCEAL2Q9H3H9 227 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-213ENST00000550629 OSGEPL1Q9H4B0 414 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 CAB39LQ9H9S4 337 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 NMRAL1Q9HBL8 299 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 SARS2Q9NP81 518 aaKnown RBP5.56□□□□□ -1.52
SCAF11-213ENST00000550629 POT1Q9NUX5 634 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 MKS1Q9NXB0 559 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 GALPQ9UBC7 116 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 POLG2Q9UHN1 485 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 KCNK6Q9Y257 313 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 DNAJC16Q9Y2G8 782 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 COLEC10Q9Y6Z7 277 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 SPAG17Q6Q759 2223 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 OTOGLQ3ZCN5 2332 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 LAMA1P25391 3075 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 LRP4O75096 1905 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SMIM23A6NLE4 172 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 MYO1CO00159 1063 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CDX4O14627 284 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 PHGDHO43175 533 aaKnown RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 NUDT21O43809 227 aaKnown RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SNX2O60749 519 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SDC3O75056 442 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 PSIP1O75475 530 aaKnown RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 KLHL2O95198 593 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 ABHD16AO95870 558 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CATP04040 527 aaKnown RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 F7P08709 466 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CCDC166P0CW27 439 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 GIMD1P0DJR0 217 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 BRAFP15056 766 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 ITGB6P18564 788 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SAT1P21673 171 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 AK4P27144 223 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 PDHA2P29803 388 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 PBLDP30039 288 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 HSD17B2P37059 387 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CCT5P48643 541 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 DUSP3P51452 185 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SLC18A1P54219 525 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 AP1S2P56377 157 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 UBE2IP63279 158 aaKnown RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CDKL1Q00532 357 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SLC18A2Q05940 514 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 MALLQ13021 153 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 C1orf61Q13536 156 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 NR1D2Q14995 579 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 ARHGAP19Q14CB8 494 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 ACAP2Q15057 778 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SF3A2Q15428 464 aaKnown RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CCDC6Q16204 474 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 RPE65Q16518 533 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 DEFB133Q30KQ1 61 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 AASDHQ4L235 1098 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 C14orf28Q4W4Y0 310 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 TIGD2Q4W5G0 525 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 ACSBG2Q5FVE4 666 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 AGBL2Q5U5Z8 902 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 MBNL2Q5VZF2 373 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms