RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 ZNF404Q494X3 552 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ZFP69Q49AA0 526 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 FBXO43Q4G163 708 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CDONQ4KMG0 1287 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 FAM98BQ52LJ0 330 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 AGKQ53H12 422 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PLA1AQ53H76 456 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 XKR9Q5GH70 373 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PAGE2BQ5JRK9 111 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TOR1AIP1Q5JTV8 583 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 KCNT1Q5JUK3 1230 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 C6orf141Q5SZD1 244 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SYT6Q5T7P8 510 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ARHGEF16Q5VV41 709 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 RSBN1Q5VWQ0 802 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TIGD3Q6B0B8 471 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TXNRD3NBQ6F5E7 133 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CTRB2Q6GPI1 263 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CYB5RLQ6IPT4 315 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SLC39A4Q6P5W5 647 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TMEM65Q6PI78 240 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SLC16A12Q6ZSM3 486 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PTCHD4Q6ZW05 846 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ZNF534Q76KX8 674 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 BEND5Q7L4P6 421 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SLC26A9Q7LBE3 791 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 EFL1Q7Z2Z2 1120 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 R3HCC1LQ7Z5L2 792 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TMEM135Q86UB9 458 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SLC22A16Q86VW1 577 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 P2RY8Q86VZ1 359 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ZC3HC1Q86WB0 502 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PLCZ1Q86YW0 608 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 EPHX4Q8IUS5 362 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PLD3Q8IV08 490 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 KRT78Q8N1N4 520 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 DCLK2Q8N568 766 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 WDTC1Q8N5D0 677 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CCDC185Q8N715 623 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PQLC3Q8N755 202 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PAF1Q8N7H5 531 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PJA1Q8NG27 643 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 OR52E4Q8NGH9 312 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 MAFAQ8NHW3 353 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 DYNC2LI1Q8TCX1 351 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 MAPK15Q8TD08 544 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 WIPF2Q8TF74 440 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TMCO6Q96DC7 493 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 YIPF6Q96EC8 236 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CERS2Q96G23 380 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SLC39A13Q96H72 371 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 RIPOR3Q96MK2 946 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ZNF560Q96MR9 790 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 NODALQ96S42 347 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 VAT1Q99536 393 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 GPR22Q99680 433 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 NPAS2Q99743 824 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 COQ7Q99807 217 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 RBM4BQ9BQ04 359 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CLSTN3Q9BQT9 956 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PI4K2AQ9BTU6 479 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 RBM4Q9BWF3 364 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CHID1Q9BWS9 393 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 NXF2Q9GZY0 626 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 NAA50Q9GZZ1 169 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 LHPPQ9H008 270 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 FAM234AQ9H0X4 552 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PCDHAC1Q9H158 963 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 DSN1Q9H410 356 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 RHOJQ9H4E5 214 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 WDR55Q9H6Y2 383 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CYP3A43Q9HB55 503 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 APOBEC3GQ9HC16 384 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 RAVER2Q9HCJ3 691 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 AGO4Q9HCK5 861 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CISHQ9NSE2 258 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SACM1LQ9NTJ5 587 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 MTMR10Q9NXD2 777 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SCN3BQ9NY72 215 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 MRPL39Q9NYK5 338 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CCDC59Q9P031 241 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 WRAP73Q9P2S5 460 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 DNMT3BQ9UBC3 853 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ZDHHC2Q9UIJ5 367 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 OSGIN1Q9UJX0 560 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 C3orf18Q9UK00 162 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PROCRQ9UNN8 238 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 AURKCQ9UQB9 309 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TRAPPC4Q9Y296 219 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ACOT9Q9Y305 439 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SPEF1Q9Y4P9 236 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ORC6Q9Y5N6 252 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 UBIAD1Q9Y5Z9 338 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CNTNAP1P78357 1384 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PTPRJQ12913 1337 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 COL2A1P02458 1487 aaPredicted RBP3.18□□□□□ -1.9
CCNT1-203ENST00000550457 PABPN1LA6NDY0 278 aaKnown RBP3.18□□□□□ -1.9
CCNT1-203ENST00000550457 HMX3A6NHT5 357 aa3.18□□□□□ -1.9
CCNT1-203ENST00000550457 C2CD4BA6NLJ0 364 aa3.18□□□□□ -1.9
CCNT1-203ENST00000550457 TMEM233B4DJY2 109 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms