RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 PMP22Q01453 160 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 MEP1AQ16819 746 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 ZNF630Q2M218 657 aaPredicted RBP7.18□□□□□ -1.26
NEK3-201ENST00000550331 KRTCAP3Q53RY4 240 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 ZNF766Q5HY98 468 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 ACER2Q5QJU3 275 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 MFSD4BQ5TF39 518 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 UGT3A1Q6NUS8 523 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 TTC27Q6P3X3 843 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 XKRXQ6PP77 449 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 AGTRAPQ6RW13 159 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 LANCL3Q6ZV70 420 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 PRSS41Q7RTY9 318 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 PIWIL4Q7Z3Z4 852 aaKnown RBP7.18□□□□□ -1.26
NEK3-201ENST00000550331 ANKRD37Q7Z713 158 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 MRGPRGQ86SM5 289 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 ASPGQ86U10 573 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 C17orf64Q86WR6 236 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 PALM2Q8IXS6 379 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 CPNE9Q8IYJ1 553 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 LGI4Q8N135 537 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 BEST3Q8N1M1 668 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 SLC5A8Q8N695 610 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 MDS2Q8NDY4 140 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 M1APQ8TC57 530 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 TM4SF19Q96DZ7 209 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 SCMH1Q96GD3 660 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 OR1F2PQ96R84 312 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 FAM167BQ9BTA0 163 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 AARSD1Q9BTE6 412 aaKnown RBP7.18□□□□□ -1.26
NEK3-201ENST00000550331 C20orf96Q9NUD7 363 aaPredicted RBP7.18□□□□□ -1.26
NEK3-201ENST00000550331 HCN3Q9P1Z3 774 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 TRMT6Q9UJA5 497 aaKnown RBP7.18□□□□□ -1.26
NEK3-201ENST00000550331 FBXO5Q9UKT4 447 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 SLC22A7Q9Y694 548 aa7.18□□□□□ -1.26
NEK3-201ENST00000550331 ANKHD1Q8IWZ3 2542 aaKnown RBP7.18□□□□□ -1.26
NEK3-201ENST00000550331 ABCA2Q9BZC7 2435 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 ASPDHA6ND91 283 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 GOLGA8MH3BSY2 632 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 SGK494L7N484 410 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 TTI1O43156 1089 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 HAUS5O94927 633 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 STATHP02808 62 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 JAK1P23458 1154 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 EEF1DP29692 281 aaKnown RBP7.17□□□□□ -1.26
NEK3-201ENST00000550331 GRK3P35626 688 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 COILP38432 576 aaPredicted RBP7.17□□□□□ -1.26
NEK3-201ENST00000550331 RGS4P49798 205 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 TERF1P54274 439 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 TAS2R50P59544 299 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 SKP1P63208 163 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 MPP1Q00013 466 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 RHAGQ02094 409 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 PWP1Q13610 501 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 TUBA3CQ13748 450 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 ABRAXAS2Q15018 415 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 HERC3Q15034 1050 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 TESK1Q15569 626 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 OR1C1Q15619 314 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 CYP1B1Q16678 543 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 KCTD19Q17RG1 926 aaPredicted RBP7.17□□□□□ -1.26
NEK3-201ENST00000550331 HSP90AA5PQ58FG0 334 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 CAPN13Q6MZZ7 669 aaPredicted RBP7.17□□□□□ -1.26
NEK3-201ENST00000550331 NIPAL1Q6NVV3 410 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 TUBA3EQ6PEY2 450 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 PAPD4Q6PIY7 484 aaKnown RBP7.17□□□□□ -1.26
NEK3-201ENST00000550331 LCTLQ6UWM7 567 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 STRA8Q7Z7C7 330 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 SLC26A11Q86WA9 606 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 PDSS2Q86YH6 399 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 CRLF3Q8IUI8 442 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 AGGF1Q8N302 714 aaeCLIP7.17□□□□□ -1.26
NEK3-201ENST00000550331 RASGEF1CQ8N431 466 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 HORMAD2Q8N7B1 307 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 MFSD9Q8NBP5 474 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.17□□□□□ -1.26
NEK3-201ENST00000550331 KCT2Q8NC54 265 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 C2CD4AQ8NCU7 369 aaPredicted RBP7.17□□□□□ -1.26
NEK3-201ENST00000550331 PLPP5Q8NEB5 264 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 ABHD11Q8NFV4 315 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 GABPB2Q8TAK5 448 aaPredicted RBP7.17□□□□□ -1.26
NEK3-201ENST00000550331 SLC13A3Q8WWT9 602 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 MAGOHBQ96A72 148 aaKnown RBP7.17□□□□□ -1.26
NEK3-201ENST00000550331 MAGED4Q96JG8 741 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 GPR137Q96N19 417 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 SIGLEC12Q96PQ1 595 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 LPAR4Q99677 370 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 UTP23Q9BRU9 249 aaKnown RBP7.17□□□□□ -1.26
NEK3-201ENST00000550331 HAUS8Q9BT25 410 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 SARGQ9BW04 601 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 SGPP1Q9BX95 441 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 KCNK13Q9HB14 408 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 PARVBQ9HBI1 364 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 TAS2R13Q9NYV9 303 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 ADAMTS6Q9UKP5 1117 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 SH2B3Q9UQQ2 575 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 PDE10AQ9Y233 779 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 ZNF835Q9Y2P0 537 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 NAALAD2Q9Y3Q0 740 aa7.17□□□□□ -1.26
NEK3-201ENST00000550331 NEU2Q9Y3R4 380 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms