RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 A0A075B6Q4 140 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 TRAV6A0A075B6T7 132 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 THP07101 528 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 SDC2P34741 201 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 MRPL19P49406 292 aaKnown RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 LRRC32Q14392 662 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 PTGES3Q15185 160 aaKnown RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 AGMOQ6ZNB7 445 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 LINC01465Q8N7H1 131 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 QRFPRQ96P65 431 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 OPALINQ96PE5 141 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 SIGLEC11Q96RL6 698 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 NLE1Q9NVX2 485 aaPredicted RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 TRAPPC4Q9Y296 219 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 KCNE2Q9Y6J6 123 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 NFKBIEO00221 500 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 KPNA5O15131 536 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ENTPD6O75354 484 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 SLC25A14O95258 325 aaPredicted RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 C1QBP02746 253 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ALAS2P22557 587 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 NUDT1P36639 197 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ETV6P41212 452 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 CLCN7P51798 805 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ATN1P54259 1190 aaPredicted RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 ASAH1Q13510 395 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 C1DQ13901 141 aaKnown RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 DOC2BQ14184 412 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 STK11Q15831 433 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 MS4A13Q5J8X5 152 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 CREB3L2Q70SY1 520 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 CHMP1BQ7LBR1 199 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 AQP11Q8NBQ7 271 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 C8orf48Q96LL4 319 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 SERPINB11Q96P15 392 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 B3GNT4Q9C0J1 378 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 RACGAP1Q9H0H5 632 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 TPT1P8Q9HAU6 139 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 SPIN1Q9Y657 262 aaPredicted RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 INMT-MINDY4F8WBC2 141 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 PCDH17O14917 1159 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 CASKO14936 926 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ADAMDEC1O15204 470 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 PLA2G10O15496 165 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ORC5O43913 435 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 GSTM1P09488 218 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 CTSHP09668 335 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 RHOQP17081 205 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 PBX3P40426 434 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 TSTA3Q13630 321 aaPredicted RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 CRTC2Q53ET0 693 aaPredicted RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 SYT14Q8NB59 555 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 RRAGCQ9HB90 399 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 HHATLQ9HCP6 504 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ARL15Q9NXU5 204 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ABT1Q9ULW3 272 aaKnown RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 VPS9D1Q9Y2B5 631 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 POFUT2Q9Y2G5 429 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 RAI2Q9Y5P3 530 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 BRCA1P38398 1863 aaKnown RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 CBX4O00257 560 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 SH3BP5O60239 455 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 RGRP47804 291 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 SOX9P48436 509 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 GZMMP51124 257 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 RPL6Q02878 288 aaKnown RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 BTN1A1Q13410 526 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 SNTA1Q13424 505 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 C10orf120Q5SQS8 335 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 PLAG1Q6DJT9 500 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 XKRXQ6PP77 449 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 CBLL1Q75N03 491 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 GET4Q7L5D6 327 aaPredicted RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 LRRTM3Q86VH5 581 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ATCAYQ86WG3 371 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 RDH10Q8IZV5 341 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 DNAJC5GQ8N7S2 189 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 C9orf43Q8TAL5 461 aaPredicted RBP11.67□□□□□ -0.54
VDR-208ENST00000550325 GDF15Q99988 308 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 BOCQ9BWV1 1114 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 MED28Q9H204 178 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ANKRA2Q9H9E1 313 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 NUP50Q9UKX7 468 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 ING4Q9UNL4 249 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 SLC9A8Q9Y2E8 581 aa11.67□□□□□ -0.54
VDR-208ENST00000550325 A0A1B0GVC2 190 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 A6NIN4 97 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 TAPBPO15533 448 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 KLK8O60259 260 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 TOXO94900 526 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 CLDN9O95484 217 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 KCNE1P15382 129 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 SDC1P18827 310 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 ITPKAP23677 461 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 GPR15P49685 360 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 CLDN8P56748 225 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 RAB14P61106 215 aa11.66□□□□□ -0.54
VDR-208ENST00000550325 LRRC17Q8N6Y2 441 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms