RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ALDH18A1P54886 795 aaKnown RBP10.61□□□□□ -0.71
RAB5B-208ENST00000550283 CDH13P55290 713 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 RAPSNQ13702 412 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 FAM53BQ14153 422 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 PCBP2Q15366 365 aaKnown RBP eCLIP10.61□□□□□ -0.71
RAB5B-208ENST00000550283 GARNL3Q5VVW2 1013 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 PRMT9Q6P2P2 845 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 KIRREL2Q6UWL6 708 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 TMIGD1Q6UXZ0 262 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 CAMKVQ8NCB2 501 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 TMEM52Q8NDY8 209 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 CAVIN3Q969G5 261 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 QRFPRQ96P65 431 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 F2RL3Q96RI0 385 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 AIF1LQ9BQI0 150 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 SORBS1Q9BX66 1292 aaKnown RBP10.61□□□□□ -0.71
RAB5B-208ENST00000550283 WDR54Q9H977 334 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 LANCL2Q9NS86 450 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 GPRC5BQ9NZH0 403 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 OPTCQ9UBM4 332 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 GPN3Q9UHW5 284 aaPredicted RBP10.61□□□□□ -0.71
RAB5B-208ENST00000550283 POLHQ9Y253 713 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 MAN2B2Q9Y2E5 1009 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 RNF11Q9Y3C5 154 aa10.61□□□□□ -0.71
RAB5B-208ENST00000550283 TLN1Q9Y490 2541 aaKnown RBP10.61□□□□□ -0.71
RAB5B-208ENST00000550283 TNRC6AQ8NDV7 1962 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 IGHV3-20A0A0C4DH32 117 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 TLDC2A0PJX2 215 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 LRIT2A6NDA9 550 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 G3V2L1 256 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 TGFBR3LH3BV60 316 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 RTCAO00442 366 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 BMP10O95393 424 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 NSA2O95478 260 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 ETHE1O95571 254 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 ALBP02768 609 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 RPS17P08708 135 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 NUDT17P0C025 328 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 COL6A2P12110 1019 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 ALOX12P18054 663 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 NEK2P51955 445 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 HNRNPFP52597 415 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 MC1RQ01726 317 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 IRF8Q02556 426 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 PCDH1Q08174 1060 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 TRAF3Q13114 568 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 KCNAB2Q13303 367 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 PWP1Q13610 501 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 GTF2H2Q13888 395 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 RUNX2Q13950 521 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 SSPNQ14714 243 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 UNC50Q53HI1 259 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 GTF2H2CQ6P1K8 395 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 ZNF793Q6ZN11 406 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 LANCL3Q6ZV70 420 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 TAOK1Q7L7X3 1001 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 CCDC91Q7Z6B0 441 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 TDRPQ86YL5 185 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 C4orf33Q8N1A6 199 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 ZNF843Q8N446 348 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 OR51Q1Q8NH59 317 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 ZNF473Q8WTR7 871 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 APOBEC4Q8WW27 367 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 MS4A6EQ96DS6 147 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 PTCD3Q96EY7 689 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 ABHD17AQ96GS6 310 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 PEX11GQ96HA9 241 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 TMEM237Q96Q45 408 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 MRPL57Q9BQC6 102 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 YIPF2Q9BWQ6 316 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 VN1R1Q9GZP7 353 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 MRPL46Q9H2W6 279 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 EHD1Q9H4M9 534 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 NOL11Q9H8H0 719 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 CNOT10Q9H9A5 744 aaKnown RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 ZNF71Q9NQZ8 489 aaPredicted RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 P4HTMQ9NXG6 502 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 ZNF282Q9UDV7 671 aaPredicted RBP10.6□□□□□ -0.71
RAB5B-208ENST00000550283 C3orf18Q9UK00 162 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 FBXL4Q9UKA2 621 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 SLC22A7Q9Y694 548 aa10.6□□□□□ -0.71
RAB5B-208ENST00000550283 IQANK1A0A1B0GTG1 560 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 A6NL46 340 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 SYCE1LA8MT33 242 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 IDSB3KWA1 339 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 SAP18O00422 153 aaKnown RBP10.59□□□□□ -0.71
RAB5B-208ENST00000550283 CLGNO14967 610 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 CHST10O43529 356 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 CDC123O75794 336 aaPredicted RBP10.59□□□□□ -0.71
RAB5B-208ENST00000550283 PROCP04070 461 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 SERPINA6P08185 405 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 RBP1P09455 135 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 SLC35G6P0C7Q6 338 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 GRK3P35626 688 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 XCR1P46094 333 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 CCL11P51671 97 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 EEF1A2Q05639 463 aaKnown RBP10.59□□□□□ -0.71
RAB5B-208ENST00000550283 CASP8Q14790 479 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 TBCCQ15814 346 aa10.59□□□□□ -0.71
RAB5B-208ENST00000550283 TSNAXIP1Q2TAA8 658 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms