RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ALOX12P18054 663 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 GCAP28676 217 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 CRABP2P29373 138 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 AHRP35869 848 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 BTG2P78543 158 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 RHAGQ02094 409 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 PWP1Q13610 501 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 DOC2AQ14183 400 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 PDK4Q16654 411 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 GLE1Q53GS7 698 aaKnown RBP9.23□□□□□ -0.93
HDAC7-229ENST00000549883 XKR6Q5GH73 641 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 MFSD4BQ5TF39 518 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 B3GNTL1Q67FW5 361 aaPredicted RBP9.23□□□□□ -0.93
HDAC7-229ENST00000549883 TMEM205Q6UW68 189 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 TMIGD1Q6UXZ0 262 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 LINC00696Q6ZRV3 163 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 NDUFAF7Q7L592 441 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 TBC1D1Q86TI0 1168 aaPredicted RBP9.23□□□□□ -0.93
HDAC7-229ENST00000549883 RNF175Q8N4F7 328 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 SIRT6Q8N6T7 355 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 DCAKDQ8WVC6 231 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 SLC44A1Q8WWI5 657 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 MIB2Q96AX9 1013 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 NACC2Q96BF6 587 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 TRIM44Q96DX7 344 aaPredicted RBP9.23□□□□□ -0.93
HDAC7-229ENST00000549883 C19orf60Q96EN9 201 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 SMIM10Q96HG1 83 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 IMMP1LQ96LU5 166 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 CYTH2Q99418 400 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 PAFAH2Q99487 392 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 WDR77Q9BQA1 342 aaPredicted RBP9.23□□□□□ -0.93
HDAC7-229ENST00000549883 CD244Q9BZW8 370 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 ZNF700Q9H0M5 742 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 VPS11Q9H270 941 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 NMRAL1Q9HBL8 299 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 C14orf105Q9NVL8 296 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 ACOT9Q9Y305 439 aa9.23□□□□□ -0.93
HDAC7-229ENST00000549883 ESPL1Q14674 2120 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 SPENQ96T58 3664 aaKnown RBP9.22□□□□□ -0.93
HDAC7-229ENST00000549883 SVILO95425 2214 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 A0A087X1B8 175 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 NSG1A0A0A6YYJ2 146 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 A0A1W2PQ72 361 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 PRPF4O43172 522 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDAC7-229ENST00000549883 DPM1O60762 260 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 SIX3O95343 332 aaPredicted RBP9.22□□□□□ -0.93
HDAC7-229ENST00000549883 F10P00742 488 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 TUBB4AP04350 444 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 PRR35P0CG20 571 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 C8orf89P0DMQ9 161 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 MYBL2P10244 700 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 GNAZP19086 355 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 TYK2P29597 1187 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 MAGEA12P43365 314 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 UQCRFS1P47985 274 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 BTN3A2P78410 334 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 KCNC4Q03721 635 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 SRSF1Q07955 248 aaKnown RBP eCLIP9.22□□□□□ -0.934e-8■□□□□ 8.9
HDAC7-229ENST00000549883 RGS1Q08116 209 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 CHIT1Q13231 466 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 RUNX2Q13950 521 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 HERC3Q15034 1050 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 ANKRD37Q7Z713 158 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 CUZD1Q86UP6 607 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 CEP112Q8N8E3 955 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 CATSPER1Q8NEC5 780 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 STAG3L4Q8TBR4 150 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 BRIX1Q8TDN6 353 aaKnown RBP9.22□□□□□ -0.93
HDAC7-229ENST00000549883 CCT6BQ92526 530 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 LHPPQ9H008 270 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 RHBGQ9H310 441 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 EPB41L4BQ9H329 900 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 PLA2G3Q9NZ20 509 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 NUDT4Q9NZJ9 180 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 PTGFRNQ9P2B2 879 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 NTNG1Q9Y2I2 539 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 PCDHGB7Q9Y5F8 929 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 DOPEY2Q9Y3R5 2298 aa9.22□□□□□ -0.93
HDAC7-229ENST00000549883 RELNP78509 3460 aa9.21□□□□□ -0.93
HDAC7-229ENST00000549883 LRIT2A6NDA9 550 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 FOXO6A8MYZ6 492 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 TRIM49D1C9J1S8 452 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 TGFBR3LH3BV60 316 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 CLGNO14967 610 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 KLK8O60259 260 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 MAN1A2O60476 641 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 H2AFYO75367 372 aaKnown RBP9.21□□□□□ -0.94
HDAC7-229ENST00000549883 KLHL2O95198 593 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 FHP07954 510 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 SERPINA6P08185 405 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 MAOAP21397 527 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 CXCR2P25025 360 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 PHBP35232 272 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 SERPINB8P50452 374 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 HNRNPFP52597 415 aaKnown RBP9.21□□□□□ -0.94
HDAC7-229ENST00000549883 SRSF11Q05519 484 aaKnown RBP9.21□□□□□ -0.94
HDAC7-229ENST00000549883 ILF2Q12905 390 aaKnown RBP9.21□□□□□ -0.94
HDAC7-229ENST00000549883 ABRAXAS2Q15018 415 aa9.21□□□□□ -0.94
HDAC7-229ENST00000549883 INPP5JQ15735 1006 aaPredicted RBP9.21□□□□□ -0.94
HDAC7-229ENST00000549883 PFKFB4Q16877 469 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms