RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 VPS39Q96JC1 886 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 VPS50Q96JG6 964 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 PRAP1Q96NZ9 151 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 OR4K3Q96R72 315 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 GPR22Q99680 433 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 SPOCK3Q9BQ16 436 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 TMUB1Q9BVT8 246 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 ENKD1Q9H0I2 346 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 SMYD2Q9NRG4 433 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 ZNF282Q9UDV7 671 aaPredicted RBP9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 IKZF3Q9UKT9 509 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 MRPS2Q9Y399 296 aaKnown RBP9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 SLC22A7Q9Y694 548 aa9.2□□□□□ -0.94
SLC48A1-206ENST00000548498 DNAJC13O75165 2243 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 ABCA4P78363 2273 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 NSG1A0A0A6YYJ2 146 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 FAM95CA0A1B0GW59 222 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 CCDC189A1A4V9 331 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 FFAR3O14843 346 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 GPR42O15529 346 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 CRYABP02511 175 aaKnown RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 TUBB4AP04350 444 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 HIST1H2AGP0C0S8 130 aaPredicted RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 ESRRAP11474 423 aaPredicted RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 HIST1H2ADP20671 130 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 GGT5P36269 586 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 SMSP52788 366 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 GPX6P59796 221 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 EEF1A2Q05639 463 aaKnown RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 RBPJQ06330 500 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 PCDH1Q08174 1060 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 NAB1Q13506 487 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 NAE1Q13564 534 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 PWP1Q13610 501 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 E2F2Q14209 437 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 HKDC1Q2TB90 917 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 TMEM205Q6UW68 189 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 SYT10Q6XYQ8 523 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 MBOAT1Q6ZNC8 495 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 ADAMTSL2Q86TH1 951 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 C17orf64Q86WR6 236 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 ANKMY2Q8IV38 441 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 PALM2Q8IXS6 379 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 ZBED8Q8IZ13 594 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 GPATCH11Q8N954 259 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 FBXO25Q8TCJ0 367 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 PYROXD1Q8WU10 500 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 NRGNQ92686 78 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 RERGQ96A58 199 aaPredicted RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 SEC16BQ96JE7 1060 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 HIST1H2AHQ96KK5 128 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 UBXN10Q96LJ8 280 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 CPNE1Q99829 537 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 HIST1H2AJQ99878 128 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 TREX2Q9BQ50 279 aaPredicted RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 H2AFJQ9BTM1 129 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 FUT8Q9BYC5 575 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 TRIM54Q9BYV2 358 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 TRIM31Q9BZY9 425 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 DERL2Q9GZP9 239 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 DRC3Q9H069 523 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 RAB17Q9H0T7 212 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 TSPAN10Q9H1Z9 355 aaPredicted RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 CLK4Q9HAZ1 481 aaKnown RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 MKKSQ9NPJ1 570 aaPredicted RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 PPANQ9NQ55 473 aaKnown RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 ZDHHC18Q9NUE0 388 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 ARL15Q9NXU5 204 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 C3orf18Q9UK00 162 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 SH2B3Q9UQQ2 575 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 MEMO1Q9Y316 297 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 UTP11Q9Y3A2 253 aaKnown RBP9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 OARD1Q9Y530 152 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 EML6Q6ZMW3 1958 aa9.19□□□□□ -0.94
SLC48A1-206ENST00000548498 OR5H15A6NDH6 313 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 CXorf49A8MYA2 514 aaPredicted RBP9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 PRAMEF2O60811 474 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 SYF2O95926 243 aaKnown RBP9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 SERPINA7P05543 415 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 ITGAMP11215 1152 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 CD99P14209 185 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 IL10P22301 178 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 AHRP35869 848 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 GP5P40197 560 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 BCL6P41182 706 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 SCTRP47872 440 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 SLC6A12P48065 614 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 EFNA3P52797 238 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 CASP6P55212 293 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 SNRPNP63162 240 aaKnown RBP9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 OCA2Q04671 838 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 CKAP4Q07065 602 aaKnown RBP9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 NDUFA9Q16795 377 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 WHAMMP3Q1A5X7 153 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 HP1BP3Q5SSJ5 553 aaPredicted RBP9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 ARHGAP21Q5T5U3 1957 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 NIPAL1Q6NVV3 410 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 CCDC91Q7Z6B0 441 aa9.18□□□□□ -0.94
SLC48A1-206ENST00000548498 LAPTM4BQ86VI4 370 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms