RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 IRAK2O43187 625 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 TLX2O43763 284 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-212ENST00000546744 TLL1O43897 1013 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 SPARCP09486 303 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 EML3Q32P44 896 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 GRHL2Q6ISB3 625 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 PLD6Q8N2A8 252 aaKnown RBP12.4□□□□□ -0.42
PTCH1-212ENST00000546744 OR13F1Q8NGS4 319 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 ACDQ96AP0 544 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF354BQ96LW1 612 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF350Q9GZX5 532 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 PDZD7Q9H5P4 517 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 FARSAQ9Y285 508 aaKnown RBP12.4□□□□□ -0.42
PTCH1-212ENST00000546744 MYH6P13533 1939 aa12.4□□□□□ -0.43
PTCH1-212ENST00000546744 C2orf74A8MZ97 194 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 MCIDASD6RGH6 385 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 C1QTNF3-AMACRE9PGA6 284 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 GTPBP1O00178 669 aaKnown RBP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 RBBP9O75884 186 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 TACR2P21452 398 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 CD6P30203 668 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 MAP2K4P45985 399 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 RCAN2Q14206 197 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 XKR4Q5GH76 650 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 PRPF38BQ5VTL8 546 aaKnown RBP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 LRRC69Q6ZNQ3 347 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 KDM1BQ8NB78 822 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ZNF516Q92618 1163 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 TMEM203Q969S6 136 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 KXD1Q9BQD3 176 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 MAT2BQ9NZL9 334 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ACSL4O60488 711 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 TAL1P17542 331 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ETV6P41212 452 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 FGFBP1Q14512 234 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 CBX2Q14781 532 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 RAB41Q5JT25 222 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 SLX4IPQ5VYV7 408 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 METTL2BQ6P1Q9 378 aaKnown RBP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 LDB1Q86U70 411 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ADGRG5Q8IZF4 528 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 OR4F6Q8NGB9 312 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 TM6SF2Q9BZW4 377 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 FAM105AQ9NUU6 356 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 MGAT4CQ9UBM8 478 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 KLHL21Q9UJP4 597 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 PSAT1Q9Y617 370 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 DOCK2Q92608 1830 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ZNF541Q9H0D2 1346 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 OR1I1O60431 355 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ALX3O95076 343 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ATE1O95260 518 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 PRKACGP22612 351 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 CRHBPP24387 322 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 GADD45AP24522 165 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ACVR2AP27037 513 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 UQCRC1P31930 480 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 GRK6P43250 576 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 CRISP1P54107 249 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 MS4A2Q01362 244 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 OCLNQ16625 522 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 MPPE1Q53F39 396 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 UBE2UQ5VVX9 321 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ARMC10Q8N2F6 343 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 SAMD12Q8N8I0 201 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 DCBLD1Q8N8Z6 715 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 SIDT2Q8NBJ9 832 aaKnown RBP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ATP6V1C2Q8NEY4 427 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 OR14K1Q8NGZ2 314 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 HASPINQ8TF76 798 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 RERGQ96A58 199 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 VMP1Q96GC9 406 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 FUBP3Q96I24 572 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 CTRCQ99895 268 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 PELOQ9BRX2 385 aaKnown RBP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 NME4O00746 187 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 AOC2O75106 756 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 M6PRP20645 277 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 HOXD13P35453 343 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 CASP3P42574 277 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 DPP6P42658 865 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 TRAM2Q15035 370 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 OR4F3Q6IEY1 312 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 SLC27A4Q6P1M0 643 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 TIAM2Q8IVF5 1701 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 SYNPOQ8N3V7 929 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 FTMTQ8N4E7 242 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 ADAMTS16Q8TE57 1224 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 CXorf40AQ8TE69 158 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 SLC22A17Q8WUG5 538 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 KCNN1Q92952 543 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 SGTBQ96EQ0 304 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 PRR11Q96HE9 360 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-212ENST00000546744 PIP5K1AQ99755 562 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 SLC29A1Q99808 456 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 BCL2L14Q9BZR8 327 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 OR51V1Q9H2C8 321 aa12.39□□□□□ -0.43
PTCH1-212ENST00000546744 CHD4Q14839 1912 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 TRAV6A0A075B6T7 132 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms