RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 QPCTLQ9NXS2 382 aa15.19■□□□□ 0.02
LDLR-204ENST00000545707 ZNF226Q9NYT6 803 aa15.19■□□□□ 0.02
LDLR-204ENST00000545707 RHCGQ9UBD6 479 aa15.19■□□□□ 0.02
LDLR-204ENST00000545707 PADI2Q9Y2J8 665 aa15.19■□□□□ 0.02
LDLR-204ENST00000545707 MAP4K5Q9Y4K4 846 aa15.19■□□□□ 0.02
LDLR-204ENST00000545707 MICAL3Q7RTP6 2002 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 DOCK6Q96HP0 2047 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 H0YIV9 168 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 PITPNM1O00562 1244 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 TLL1O43897 1013 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 CNOT3O75175 753 aaKnown RBP15.18■□□□□ 0.02
LDLR-204ENST00000545707 PSIP1O75475 530 aaKnown RBP15.18■□□□□ 0.02
LDLR-204ENST00000545707 TGFB1P01137 390 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 PTHP01270 115 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 EIF2DP41214 584 aaKnown RBP15.18■□□□□ 0.02
LDLR-204ENST00000545707 GANABQ14697 944 aaKnown RBP15.18■□□□□ 0.02
LDLR-204ENST00000545707 ZNF404Q494X3 552 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 MPP7Q5T2T1 576 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 AGAP7PQ5VUJ5 663 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 GRHL2Q6ISB3 625 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 SLC39A11Q8N1S5 342 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 ZNF366Q8N895 744 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 CYB5D2Q8WUJ1 264 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 TMEM159Q96B96 161 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 ABHD8Q96I13 439 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 CPEB1Q9BZB8 566 aaKnown RBP15.18■□□□□ 0.02
LDLR-204ENST00000545707 BTNL2Q9UIR0 455 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 CAB39Q9Y376 341 aaPredicted RBP15.18■□□□□ 0.02
LDLR-204ENST00000545707 CLCA1A8K7I4 914 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 A8MU76 341 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 PCDH17O14917 1159 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 DSCR3O14972 297 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 LEFTY1O75610 366 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 ADRA2AP08913 450 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 ZNF8P17098 575 aaPredicted RBP15.18■□□□□ 0.02
LDLR-204ENST00000545707 PCGF2P35227 344 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 CTSKP43235 329 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 ELP6Q0PNE2 266 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 TP53BP2Q13625 1128 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 MMP21Q8N119 569 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 LGI4Q8N135 537 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 ZNF675Q8TD23 568 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 ZNF558Q96NG5 402 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 OR51B5Q9H339 312 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 SPASTQ9UBP0 616 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 SLC25A13Q9UJS0 675 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 RBMX2Q9Y388 322 aaKnown RBP15.18■□□□□ 0.02
LDLR-204ENST00000545707 PCDHGA2Q9Y5H1 932 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 C5orf42Q9H799 3197 aa15.18■□□□□ 0.02
LDLR-204ENST00000545707 UGDHO60701 494 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 CDK1P06493 297 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 WEE1P30291 646 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 PRSS53Q2L4Q9 553 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 ARSIQ5FYB1 569 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 LINC00299Q6ZSB3 139 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 METTL3Q86U44 580 aaKnown RBP15.17■□□□□ 0.02
LDLR-204ENST00000545707 LYSMD2Q8IV50 215 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 PSD4Q8NDX1 1056 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 WDR48Q8TAF3 677 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 COQ8BQ96D53 544 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 Q96MT0 163 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 PSD2Q9BQI7 771 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 CORO1BQ9BR76 489 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 CHCHD6Q9BRQ6 235 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 SLC35A5Q9BS91 424 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 CENPOQ9BU64 300 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 METTL15A6NJ78 407 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 NPC1O15118 1278 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 TGM5O43548 720 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 TIA1P31483 386 aaKnown RBP eCLIP15.17■□□□□ 0.021e-7■□□□□ 9.9
LDLR-204ENST00000545707 HNF4AP41235 474 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 SLC7A9P82251 487 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 ST3GAL4Q11206 333 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 SCARB2Q14108 478 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 MPEG1Q2M385 716 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 STEAP3Q658P3 488 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 ARMCX6Q7L4S7 300 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 STX19Q8N4C7 294 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 ITPKCQ96DU7 683 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 LINC00597Q9H2U6 94 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 HCFC1R1Q9NWW0 138 aa15.17■□□□□ 0.02
LDLR-204ENST00000545707 FAM227AF5H4B4 570 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 KPNA5O15131 536 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 GRM6O15303 877 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 ALDH1A1P00352 501 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 ALOX5P09917 674 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 CTSAP10619 480 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 SPNP16150 400 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 CCR2P41597 374 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 ASMTP46597 345 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 PRIM2P49643 509 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 DOC2BQ14184 412 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 ARMCX4Q5H9R4 360 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 ANXA8L1Q5VT79 327 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 TMEM215Q68D42 235 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 SLC46A3Q7Z3Q1 461 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 ZNF605Q86T29 641 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 RNF130Q86XS8 419 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 TMC8Q8IU68 726 aa15.16■□□□□ 0.02
LDLR-204ENST00000545707 RASGRP3Q8IV61 690 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms