RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PRKAA2P54646 552 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 TRAF3Q13114 568 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 LINC00303Q3SY05 128 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 CCDC153Q494R4 210 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 ZNF678Q5SXM1 525 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 MED27Q6P2C8 311 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 SHISA5Q8N114 240 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 BANPQ8N9N5 519 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 OR52B6Q8NGF0 335 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 ZCCHC10Q8TBK6 192 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 STT3BQ8TCJ2 826 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 ZNF473Q8WTR7 871 aaKnown RBP18.12■□□□□ 0.49
DDX55-211ENST00000544429 THAP4Q8WY91 577 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 UBE2E3Q969T4 207 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 COL26A1Q96A83 441 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 MS4A6EQ96DS6 147 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 L3HYPDHQ96EM0 354 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 TMEM237Q96Q45 408 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 NOL11Q9H8H0 719 aaKnown RBP18.12■□□□□ 0.49
DDX55-211ENST00000544429 ANKHQ9HCJ1 492 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 MKKSQ9NPJ1 570 aaPredicted RBP18.12■□□□□ 0.49
DDX55-211ENST00000544429 NAALAD2Q9Y3Q0 740 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 ANGPTL3Q9Y5C1 460 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 ANKDD1BA6NHY2 528 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 COPEO14579 308 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 KLHL18O94889 574 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 ZNF888P0CJ79 500 aaPredicted RBP18.11■□□□□ 0.49
DDX55-211ENST00000544429 IMPDH1P20839 514 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 FOLR3P41439 243 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 SYT16Q17RD7 645 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 GGTA1PQ4G0N0 100 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 UNC50Q53HI1 259 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 VWA2Q5GFL6 755 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 NIPAL1Q6NVV3 410 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 ZYG11AQ6WRX3 759 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 MED25Q71SY5 747 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 ABHD13Q7L211 337 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 SLC22A9Q8IVM8 553 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 ZC3H7AQ8IWR0 971 aaKnown RBP18.11■□□□□ 0.49
DDX55-211ENST00000544429 C4orf33Q8N1A6 199 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 RDH11Q8TC12 318 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 WBP1Q96G27 269 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 APOPT1Q96IL0 206 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 ZIM3Q96PE6 472 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 ACTR8Q9H981 624 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 CLK4Q9HAZ1 481 aaKnown RBP18.11■□□□□ 0.49
DDX55-211ENST00000544429 POLHQ9Y253 713 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 KCNMB2Q9Y691 235 aa18.11■□□□□ 0.49
DDX55-211ENST00000544429 A0A1B0GTL3 188 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 CDC14CA4D256 554 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 URADA6NGE7 173 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 SGK494L7N484 410 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 SERPIND1P05546 499 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 MMP11P24347 488 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 SERPINB1P30740 379 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 PIK3CBP42338 1070 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 EFNA3P52797 238 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 STXBP1P61764 594 aaKnown RBP18.1■□□□□ 0.49
DDX55-211ENST00000544429 MAT1AQ00266 395 aaKnown RBP18.1■□□□□ 0.49
DDX55-211ENST00000544429 HIST2H2ACQ16777 129 aaPredicted RBP18.1■□□□□ 0.49
DDX55-211ENST00000544429 DEFB134Q4QY38 66 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 HIST2H2AA3Q6FI13 130 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 BORAQ6PGQ7 559 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 RPS27LQ71UM5 84 aaKnown RBP18.1■□□□□ 0.49
DDX55-211ENST00000544429 PPP1R32Q7Z5V6 425 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 LAPTM4BQ86VI4 370 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 APLFQ8IW19 511 aaPredicted RBP18.1■□□□□ 0.49
DDX55-211ENST00000544429 WDR20Q8TBZ3 569 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 EXTL1Q92935 676 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 GAL3ST3Q96A11 431 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 UBL7Q96S82 380 aaPredicted RBP18.1■□□□□ 0.49
DDX55-211ENST00000544429 MS4A8Q9BY19 250 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 C12orf65Q9H3J6 166 aaKnown RBP18.1■□□□□ 0.49
DDX55-211ENST00000544429 C14orf105Q9NVL8 296 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 TRPC4Q9UBN4 977 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 ADGRE2Q9UHX3 823 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 ZNF225Q9UK10 706 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 RNF11Q9Y3C5 154 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 PCDHGA11Q9Y5H2 935 aa18.1■□□□□ 0.49
DDX55-211ENST00000544429 BSNQ9UPA5 3926 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 PPP6CO00743 305 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 DNAJB6O75190 326 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 RDH16O75452 317 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 ERLIN1O75477 346 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 BMP10O95393 424 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 CLDN9O95484 217 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 B3GALT4O96024 378 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 CDH13P55290 713 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 OCA2Q04671 838 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 KLC1Q07866 573 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 KRT71Q3SY84 523 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 TOR1AIP1Q5JTV8 583 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 LRIG3Q6UXM1 1119 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 MRGPREQ86SM8 312 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 SRRM1Q8IYB3 904 aaKnown RBP18.09■□□□□ 0.49
DDX55-211ENST00000544429 OR2L5Q8NG80 312 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 OR51Q1Q8NH59 317 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 HUS1BQ8NHY5 278 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 MIEF2Q96C03 454 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 CCDC126Q96EE4 140 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms