RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 NR2C1P13056 603 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 FBLP22087 321 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 NUDT1P36639 197 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 SPINT3P49223 89 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ARFIP1P53367 373 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 MTPNP58546 118 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC9B1Q4ZJI4 515 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF648Q5T619 568 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 AAGABQ6PD74 315 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 SMARCD3Q6STE5 483 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 HPS6Q86YV9 775 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TICAM1Q8IUC6 712 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 OR2AJ1Q8NGZ0 328 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ENKURQ8TC29 256 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 LRRC46Q96FV0 321 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 SCRN2Q96FV2 425 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 IFT27Q9BW83 186 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 OSBPL11Q9BXB4 747 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 RBCK1Q9BYM8 510 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 CD244Q9BZW8 370 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF395Q9H8N7 513 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 HCSTQ9UBK5 93 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 MED31Q9Y3C7 131 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 NOX1Q9Y5S8 564 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 MYH11P35749 1972 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 NAV1Q8NEY1 1877 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 LINC01553A4QN01 128 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 H7C0S8 307 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 OR1I1O60431 355 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 UGT2B11O75310 529 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 GPIP06744 558 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 LYNP07948 512 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 C8orf89P0DMQ9 161 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ANPEPP15144 967 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 HOXC8P31273 242 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 IDH3AP50213 366 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 SCARB2Q14108 478 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ACSBG2Q5FVE4 666 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ARHGAP11AQ6P4F7 1023 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 NCEH1Q6PIU2 408 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 YTHDF3Q7Z739 585 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 GALNT5Q7Z7M9 940 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 SCD5Q86SK9 330 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 RBM15BQ8NDT2 890 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 PHOSPHO1Q8TCT1 267 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 MRPL38Q96DV4 380 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 RNF31Q96EP0 1072 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TRMT2BQ96GJ1 504 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 GFM1Q96RP9 751 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 RBM4BQ9BQ04 359 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 RBM4Q9BWF3 364 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC5A7Q9GZV3 580 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 R3HDMLQ9H3Y0 253 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 PLGRKTQ9HBL7 147 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 POPDC3Q9HBV1 291 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 MRPL22Q9NWU5 206 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 NHSL1Q5SYE7 1610 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 CPSF4LA6NMK7 179 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 H0YAE9 185 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 hCG_2039718K7EN88 272 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CLIC1O00299 241 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 DLX3O60479 287 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SCAF4O95104 1147 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SEC24AO95486 1093 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ACADLP28330 430 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 HOXC13P31276 330 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 GDI2P50395 445 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ERVFC1P60507 584 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 RACK1P63244 317 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CLDN10P78369 228 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 MEF2AQ02078 507 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CBLBQ13191 982 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 DPYSQ14117 519 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 PCBP2Q15366 365 aaKnown RBP eCLIP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 MPP7Q5T2T1 576 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 OR4F3Q6IEY1 312 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 FRRS1Q6ZNA5 592 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 IKBIPQ70UQ0 350 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 RASGEF1AQ8N9B8 481 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 OR7A2PQ8NGA2 310 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 OR4K14Q8NGD5 310 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SHKBP1Q8TBC3 707 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 GIPC3Q8TF64 312 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ZDHHC1Q8WTX9 485 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 TSEN15Q8WW01 171 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 FCGR1BQ92637 280 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 TOE1Q96GM8 510 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SIGLEC10Q96LC7 697 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 HSPA12BQ96MM6 686 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 TRAPPC9Q96Q05 1148 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 DPH7Q9BTV6 452 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CPEB1Q9BZB8 566 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 MTG2Q9H4K7 406 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF446Q9NWS9 450 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 HSFX1Q9UBD0 423 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 PRODH2Q9UF12 536 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 DKKL1Q9UK85 242 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SSR3Q9UNL2 185 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 HCN4Q9Y3Q4 1203 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 LTBP4Q8N2S1 1624 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms