RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 DEFB119Q8N690 84 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 C1orf216Q8TAB5 229 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 FLVCR1-AS1Q8TAF5 88 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 CREB3L4Q8TEY5 395 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 JPH3Q8WXH2 748 aaPredicted RBP8.92□□□□□ -0.98
GNE-206ENST00000543356 ZUFSPQ96AP4 578 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 PPM1MQ96MI6 270 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 HSPA12BQ96MM6 686 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 ANKRD27Q96NW4 1050 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 TRIM15Q9C019 465 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 REXO4Q9GZR2 422 aaKnown RBP8.92□□□□□ -0.98
GNE-206ENST00000543356 ALG2Q9H553 416 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 ANKMY1Q9P2S6 941 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 ATP6V1HQ9UI12 483 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 WBP11Q9Y2W2 641 aaKnown RBP8.92□□□□□ -0.98
GNE-206ENST00000543356 PCDHGA2Q9Y5H1 932 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 CEP192Q8TEP8 1941 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 SAP18O00422 153 aaKnown RBP8.92□□□□□ -0.98
GNE-206ENST00000543356 PLPP1O14494 284 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 HAT1O14929 419 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 NDUFS4O43181 175 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 AKAP10O43572 662 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 KLHL18O94889 574 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 FKBP9O95302 570 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 STAMBPO95630 424 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 HOXD12P35452 270 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 MSX2P35548 267 aaPredicted RBP8.92□□□□□ -0.98
GNE-206ENST00000543356 BCL6P41182 706 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 TRPC1P48995 793 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 ARFIP1P53367 373 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 WNT3P56703 355 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 ZXDAP98168 799 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 LRRC74AQ0VAA2 488 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 PDE7AQ13946 482 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 PLCL1Q15111 1095 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 ZIC1Q15915 447 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 TMEM35AQ53FP2 167 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 RUNDC3AQ59EK9 446 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 KIAA1614Q5VZ46 1190 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 LCN8Q6JVE9 175 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 PAGE2Q7Z2X7 111 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 PAQR7Q86WK9 346 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 MSRB3Q8IXL7 192 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 NAGSQ8N159 534 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 MFSD9Q8NBP5 474 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 HIPK4Q8NE63 616 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 OR7A2PQ8NGA2 310 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 SLC37A2Q8TED4 501 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 C16orf78Q8WTQ4 265 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 PYDC1Q8WXC3 89 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 DNASE2BQ8WZ79 361 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 GFM2Q969S9 779 aaKnown RBP8.92□□□□□ -0.98
GNE-206ENST00000543356 COQ8BQ96D53 544 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 MTERF3Q96E29 417 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 DUS3LQ96G46 650 aaKnown RBP8.92□□□□□ -0.98
GNE-206ENST00000543356 QRFPRQ96P65 431 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 TRAPPC9Q96Q05 1148 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 PRPF18Q99633 342 aaKnown RBP8.92□□□□□ -0.98
GNE-206ENST00000543356 SH3GL1Q99961 368 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 CENPKQ9BS16 269 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 DPH7Q9BTV6 452 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 ZNF717Q9BY31 904 aaPredicted RBP8.92□□□□□ -0.98
GNE-206ENST00000543356 PCDHAC1Q9H158 963 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 DUSP15Q9H1R2 295 aaPredicted RBP8.92□□□□□ -0.98
GNE-206ENST00000543356 REEP4Q9H6H4 257 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 SLC25A37Q9NYZ2 338 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 VAPAQ9P0L0 249 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 ADAM29Q9UKF5 820 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 AP1M2Q9Y6Q5 423 aa8.92□□□□□ -0.98
GNE-206ENST00000543356 TRBV23OR9-2A0A075B6M9 112 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 CCDC163A0A0D9SF12 145 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 H3BNX3 289 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 LCMT2O60294 686 aaKnown RBP8.91□□□□□ -0.98
GNE-206ENST00000543356 DFNA5O60443 496 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 SCN2BO60939 215 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 BCKDHBP21953 392 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 HTR1EP28566 365 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 PTPN6P29350 595 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 BSGP35613 385 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 NXPH1P58417 271 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 CYP4F2P78329 520 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 TMED1Q13445 227 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 ELOCQ15369 112 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 DUOXA1Q1HG43 343 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 ZNF362Q5T0B9 420 aaPredicted RBP8.91□□□□□ -0.98
GNE-206ENST00000543356 CPTPQ5TA50 214 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 ANXA8L1Q5VT79 327 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 IRAK1BP1Q5VVH5 260 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 OR4F3Q6IEY1 312 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 FAM71E1Q6IPT2 247 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 NANOGNBQ7Z5D8 188 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 R3HCC1LQ7Z5L2 792 aaKnown RBP8.91□□□□□ -0.98
GNE-206ENST00000543356 DHFR2Q86XF0 187 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 TMEM132CQ8N3T6 1108 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 AVL9Q8NBF6 648 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 GOLM1Q8NBJ4 401 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 CDC26Q8NHZ8 85 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 ZDHHC1Q8WTX9 485 aa8.91□□□□□ -0.98
GNE-206ENST00000543356 KCTD14Q9BQ13 255 aaPredicted RBP8.91□□□□□ -0.98
GNE-206ENST00000543356 CENPOQ9BU64 300 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms