RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 KRT78Q8N1N4 520 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 OXR1Q8N573 874 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 ZNF555Q8NEP9 628 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 OR14C36Q8NHC7 312 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 PRAP1Q96NZ9 151 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 CDCA3Q99618 268 aaPredicted RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 BHLHE41Q9C0J9 482 aaPredicted RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 LMAN2LQ9H0V9 348 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 CHST8Q9H2A9 424 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 ADNPQ9H2P0 1102 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 LIN28AQ9H9Z2 209 aaKnown RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 DDX18Q9NVP1 670 aaKnown RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 FBXL12Q9NXK8 326 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 FAF1Q9UNN5 650 aaPredicted RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 MAPRE3Q9UPY8 281 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 KCNK6Q9Y257 313 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 DGKBQ9Y6T7 804 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 TRIM64A6NGJ6 449 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 K7EQS6 105 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 ADH1BP00325 375 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 ETFAP13804 333 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 IL7RP16871 459 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 PTX3P26022 381 aaPredicted RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 SLC5A2P31639 672 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 CRYBA2P53672 197 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 PHEXP78562 749 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 IL1RL1Q01638 556 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 MYBPC3Q14896 1274 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 C10orf62Q5T681 223 aaPredicted RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 CWF19L1Q69YN2 538 aaKnown RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 OR2T5Q6IEZ7 315 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 LPCAT2Q7L5N7 544 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 ARL10Q8N8L6 244 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 ANKRD53Q8N9V6 530 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 OR2T29Q8NH02 315 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 UBE2E3Q969T4 207 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 F2RL3Q96RI0 385 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 FERD3LQ96RJ6 166 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 SLC35A5Q9BS91 424 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 TRIT1Q9H3H1 467 aaKnown RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 XKR8Q9H6D3 395 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 FZD3Q9NPG1 666 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 GPATCH2Q9NW75 528 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 TUBA8Q9NY65 449 aaPredicted RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 PTTG2Q9NZH5 202 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 PCDHGA8Q9Y5G5 932 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 SPTBN5Q9NRC6 3674 aaKnown RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 AXIN1O15169 862 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 TBX6O95947 436 aaPredicted RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 FABP3P05413 133 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 SGCGQ13326 291 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 ENPP2Q13822 863 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 FAM71E1Q6IPT2 247 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 THAP5Q7Z6K1 395 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 DCP2Q8IU60 420 aaKnown RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 C8orf59Q8N0T1 100 aaPredicted RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 PJA1Q8NG27 643 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 ELSPBP1Q96BH3 223 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 C12orf66Q96MD2 445 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 VCX3AQ9NNX9 186 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 MYNNQ9NPC7 610 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 EXD2Q9NVH0 621 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 ATAD3AQ9NVI7 634 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 USE1Q9NZ43 259 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 ZNF282Q9UDV7 671 aaPredicted RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 RSL24D1Q9UHA3 163 aaKnown RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 TMEFF2Q9UIK5 374 aaPredicted RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 BAG5Q9UL15 447 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 TICRRQ7Z2Z1 1910 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 ANKDD1BA6NHY2 528 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 RPN2P04844 631 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 KIR2DL1P43626 348 aaPredicted RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 ESRRGP62508 458 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 TCEA2Q15560 299 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 TTC23Q5W5X9 447 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 TMEM26Q6ZUK4 368 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 CBLL1Q75N03 491 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 EIF3MQ7L2H7 374 aaKnown RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 R3HCC1LQ7Z5L2 792 aaKnown RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 GPR141Q7Z602 305 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 HIPK1Q86Z02 1210 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 PLD3Q8IV08 490 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 PGBD3Q8N328 593 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 ZFAND2BQ8WV99 257 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 CXorf40BQ96DE9 158 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 INSM2Q96T92 566 aaPredicted RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 MENTQ9BUN1 341 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 NPLQ9BXD5 320 aaPredicted RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 IMP3Q9NV31 184 aaKnown RBP15.63■□□□□ 0.09
COL4A1-204ENST00000543140 SIRT5Q9NXA8 310 aa15.63■□□□□ 0.09
COL4A1-204ENST00000543140 A0A1W2PQU0 124 aa15.62■□□□□ 0.09
COL4A1-204ENST00000543140 TRIM64CA6NLI5 447 aa15.62■□□□□ 0.09
COL4A1-204ENST00000543140 PLPP1O14494 284 aa15.62■□□□□ 0.09
COL4A1-204ENST00000543140 OPN1SWP03999 348 aa15.62■□□□□ 0.09
COL4A1-204ENST00000543140 TPP2P29144 1249 aaPredicted RBP15.62■□□□□ 0.09
COL4A1-204ENST00000543140 TRIM23P36406 574 aa15.62■□□□□ 0.09
COL4A1-204ENST00000543140 DLX2Q07687 328 aaPredicted RBP15.62■□□□□ 0.09
COL4A1-204ENST00000543140 PMS2P3Q13401 168 aa15.62■□□□□ 0.09
COL4A1-204ENST00000543140 VEZF1Q14119 521 aa15.62■□□□□ 0.09
COL4A1-204ENST00000543140 MEP1AQ16819 746 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms