RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 CYP2A6P11509 494 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 CHRM3P20309 590 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 AGXTP21549 392 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 FSHRP23945 695 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 CD70P32970 193 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 HNF4AP41235 474 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 STC1P52823 247 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 PPP5CP53041 499 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 GPLD1P80108 840 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 CHAF1BQ13112 559 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 VPS26BQ4G0F5 336 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 TECRLQ5HYJ1 363 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 ATXN7L2Q5T6C5 722 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 KANK2Q63ZY3 851 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 C5orf46Q6UWT4 87 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 NUDT18Q6ZVK8 323 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 THAP5Q7Z6K1 395 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 MICU2Q8IYU8 434 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 SLC22A15Q8IZD6 547 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 C8orf59Q8N0T1 100 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 DPP10Q8N608 796 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 KDM1BQ8NB78 822 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 TRPV3Q8NET8 790 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 OR4L1Q8NH43 312 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 HUS1BQ8NHY5 278 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 WDR48Q8TAF3 677 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 ASB12Q8WXK4 309 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 PROX1Q92786 737 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 BIRC7Q96CA5 298 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 EID2BQ96D98 161 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 KCTD14Q9BQ13 255 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 PINK1Q9BXM7 581 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 DSN1Q9H410 356 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 FBRSL1Q9HCM7 1045 aaKnown RBP7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 TLR9Q9NR96 1032 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 SPATA6Q9NWH7 488 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 CHD7Q9P2D1 2997 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 PDE10AQ9Y233 779 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 PMF1-BGLAPU3KQ54 211 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 KIAA0100Q14667 2235 aaKnown RBP7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 NEMP2A6NFY4 417 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 ARPC2O15144 300 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 GMDSO60547 372 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 UPK1BO75841 260 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 PRAMEF12O95522 483 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 GLP2RO95838 553 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 PLGP00747 810 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 FABP1P07148 127 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 IFI30P13284 250 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 TSPAN8P19075 237 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 PSMB9P28065 219 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 IL12AP29459 219 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 GSTM5P46439 218 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 PSMD8P48556 350 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 PLK1P53350 603 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 YBX1P67809 324 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 ADARB1P78563 741 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 DPY19L1Q2PZI1 675 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 MPPE1Q53F39 396 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 ESCO2Q56NI9 601 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 PRSS36Q5K4E3 855 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 THEM4Q5T1C6 240 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 GLT6D1Q7Z4J2 308 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 PIM3Q86V86 326 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 ATCAYQ86WG3 371 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 NRSN1Q8IZ57 195 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 CMTM8Q8IZV2 173 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 FBXO15Q8NCQ5 510 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 C11orf65Q8NCR3 313 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 OR4K2Q8NGD2 314 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 MCFD2Q8NI22 146 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 TESCQ96BS2 214 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 SLC45A3Q96JT2 553 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 ASPSCR1Q9BZE9 553 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 ABCG8Q9H221 673 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 XKR8Q9H6D3 395 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 CATSPERZQ9NTU4 200 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 MID2Q9UJV3 735 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 PRELID3BQ9Y3B1 194 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 CHD9Q3L8U1 2897 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 A0A0U1RQS6 177 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 CXorf51AA0A1B0GTR3 108 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 AQP12BA6NM10 295 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 CRTAPO75718 401 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 TRIM16O95361 564 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 PRG2P13727 222 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 HOXA9P31269 272 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 CSNK1DP48730 415 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 FNTBP49356 437 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 GSK3AP49840 483 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 P2RY4P51582 365 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 GP2P55259 537 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 RHOAP61586 193 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 TOP3AQ13472 1001 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 CDK10Q15131 360 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 TEAD2Q15562 447 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 ASTLQ6HA08 431 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 TPGS1Q6ZTW0 290 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 RETREG3Q86VR2 466 aa7.71□□□□□ -1.18
PDLIM5-221ENST00000542407 AQP12AQ8IXF9 295 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms