RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 IGFBP5P24593 272 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 KDELR2P33947 212 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 SKIV2LQ15477 1246 aaKnown RBP14.2□□□□□ -0.14
DDX55-209ENST00000542286 TCEA2Q15560 299 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 ARHGAP15Q53QZ3 475 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 FAM83HQ6ZRV2 1179 aaPredicted RBP14.2□□□□□ -0.14
DDX55-209ENST00000542286 MMAAQ8IVH4 418 aaKnown RBP14.2□□□□□ -0.14
DDX55-209ENST00000542286 PLA2G15Q8NCC3 412 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 OR5K1Q8NHB7 308 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 SPPL3Q8TCT6 385 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 VMP1Q96GC9 406 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 CCM2Q9BSQ5 444 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 ZNF229Q9UJW7 825 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 BAG5Q9UL15 447 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 MRPS23Q9Y3D9 190 aaKnown RBP14.2□□□□□ -0.14
DDX55-209ENST00000542286 BCKDKO14874 412 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 TLL1O43897 1013 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 ETFAP13804 333 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 WASP42768 502 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 NR4A2P43354 598 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 CLK3P49761 638 aaKnown RBP14.2□□□□□ -0.14
DDX55-209ENST00000542286 CYP4F2P78329 520 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 MTAPQ13126 283 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 SLBPQ14493 270 aaKnown RBP eCLIP14.2□□□□□ -0.14
DDX55-209ENST00000542286 CTF1Q16619 201 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 SMU1Q2TAY7 513 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 ATAD3BQ5T9A4 648 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 ZNF547Q8IVP9 402 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 AADATQ8N5Z0 425 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 ZNF784Q8NCA9 323 aaPredicted RBP14.2□□□□□ -0.14
DDX55-209ENST00000542286 AMBNQ9NP70 447 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 ENPP5Q9UJA9 477 aa14.2□□□□□ -0.14
DDX55-209ENST00000542286 PLXNA2O75051 1894 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.19□□□□□ -0.14
DDX55-209ENST00000542286 M0R129 80 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 SLC1A7O00341 560 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 RTCAO00442 366 aaKnown RBP14.19□□□□□ -0.14
DDX55-209ENST00000542286 KRT75O95678 551 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 CATP04040 527 aaKnown RBP14.19□□□□□ -0.14
DDX55-209ENST00000542286 BMP4P12644 408 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 MAPK1P28482 360 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 ARPC4P59998 168 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 SP140Q13342 867 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 CPTPQ5TA50 214 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 CCDC81Q6ZN84 652 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 DPPA4Q7L190 304 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 CLIP4Q8N3C7 705 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 MFSD4AQ8N468 514 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 LEMD2Q8NC56 503 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 CSGALNACT1Q8TDX6 532 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 HHIPQ96QV1 700 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 GPATCH2Q9NW75 528 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 C5AR2Q9P296 337 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 ERVK-18Q9QC07 812 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 SAMHD1Q9Y3Z3 626 aaKnown RBP14.19□□□□□ -0.14
DDX55-209ENST00000542286 F5P12259 2224 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 MGAT4DA6NG13 374 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 SCAMP2O15127 329 aaKnown RBP14.19□□□□□ -0.14
DDX55-209ENST00000542286 LATO43561 262 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 C1orf105O95561 183 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 CISD3P0C7P0 127 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 ADH5P11766 374 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 NPPBP16860 134 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 SERPINB1P30740 379 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 TGFBR1P36897 503 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 CRATP43155 626 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 PRLHRP49683 370 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 DGCR6Q14129 220 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 FNDC3BQ53EP0 1204 aaKnown RBP14.19□□□□□ -0.14
DDX55-209ENST00000542286 SMUG1Q53HV7 270 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 PRSS36Q5K4E3 855 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 RBM48Q5RL73 367 aaKnown RBP14.19□□□□□ -0.14
DDX55-209ENST00000542286 LIPJQ5W064 366 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 OR2T5Q6IEZ7 315 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 METTL2BQ6P1Q9 378 aaKnown RBP14.19□□□□□ -0.14
DDX55-209ENST00000542286 RNF165Q6ZSG1 346 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 PJA1Q8NG27 643 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 OR2T29Q8NH02 315 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 HOXD1Q9GZZ0 328 aa14.19□□□□□ -0.14
DDX55-209ENST00000542286 PNMA8BQ9ULN7 279 aaPredicted RBP14.19□□□□□ -0.14
DDX55-209ENST00000542286 GCM2O75603 506 aaPredicted RBP14.18□□□□□ -0.14
DDX55-209ENST00000542286 CCNDBP1O95273 360 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 C6orf47O95873 294 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 IDSP22304 550 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 PTGER1P34995 402 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 HBA1P69905 142 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 FPGSQ05932 587 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 TTC23Q5W5X9 447 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 SLCO4C1Q6ZQN7 724 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 AKAP14Q86UN6 197 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 CCDC71Q8IV32 467 aaPredicted RBP14.18□□□□□ -0.14
DDX55-209ENST00000542286 OR4A15Q8NGL6 344 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 TP63Q9H3D4 680 aaPredicted RBP14.18□□□□□ -0.14
DDX55-209ENST00000542286 KLHL42Q9P2K6 505 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 TESMINQ9Y4I5 508 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 NADKO95544 446 aaPredicted RBP14.18□□□□□ -0.14
DDX55-209ENST00000542286 C6P13671 934 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 ZNF8P17098 575 aaPredicted RBP14.18□□□□□ -0.14
DDX55-209ENST00000542286 PRPH2P23942 346 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 GPR1P46091 355 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms