RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 B3GALT5Q9Y2C3 310 aa3.21□□□□□ -1.9
LEMD3-204ENST00000542032 MRPL11Q9Y3B7 192 aaKnown RBP3.21□□□□□ -1.9
LEMD3-204ENST00000542032 CHTOPQ9Y3Y2 248 aaKnown RBP3.21□□□□□ -1.9
LEMD3-204ENST00000542032 U3KQV3 271 aa3.21□□□□□ -1.9
LEMD3-204ENST00000542032 TRBV2A0A0J9YWF9 115 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 CFAP73A6NFT4 308 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 DUXAA6NLW8 204 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 YDJCA8MPS7 323 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 H0YIG0 161 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 H0YIV9 168 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 J3QR06 171 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 TTI1O43156 1089 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 NUDT21O43809 227 aaKnown RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 EXTL3O43909 919 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 GPRIN2O60269 458 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 SCGB2A1O75556 95 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 SLITRK3O94933 977 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 BMP10O95393 424 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 TBX6O95947 436 aaPredicted RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 PCCBP05166 539 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 SBK2P0C263 348 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 DANCRP0C864 163 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 C8orf89P0DMQ9 161 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 AREGP15514 252 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 GJA1P17302 382 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 GALP22466 123 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 HNRNPA2B1P22626 353 aaKnown RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 EPHA2P29317 976 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 RFC4P35249 363 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 TAGLN2P37802 199 aaKnown RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 FRKP42685 505 aaPredicted RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 METAP1P53582 386 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 PLD1Q13393 1074 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 ITGA9Q13797 1035 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 KRT33BQ14525 404 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 UGP2Q16851 508 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 CCDC57Q2TAC2 916 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 CFAP221Q4G0U5 840 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 IQCCQ4KMZ1 466 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 TAF1BQ53T94 588 aaPredicted RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 ZNF789Q5FWF6 425 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 NDUFAF5Q5TEU4 345 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 AADACL4Q5VUY2 407 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 RAET1GQ6H3X3 334 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 TAS2R42Q7RTR8 314 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 VASH2Q86V25 355 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 ZNF410Q86VK4 478 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 ZCCHC7Q8N3Z6 543 aaKnown RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 FAM133AQ8N9E0 248 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 CLEC1AQ8NC01 280 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 CCNYQ8ND76 341 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 ZNF248Q8NDW4 579 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 C9orf43Q8TAL5 461 aaPredicted RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 SLC47A1Q96FL8 570 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 PRMT6Q96LA8 375 aaPredicted RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 NSMCE2Q96MF7 247 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 ZNF560Q96MR9 790 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 FAM210AQ96ND0 272 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 MS4A10Q96PG2 267 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 NUDCD1Q96RS6 583 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 CPNE1Q99829 537 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 CCDC77Q9BR77 488 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 EDEM2Q9BV94 578 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 NFKBIZQ9BYH8 718 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 SLC7A5P2Q9GIP4 190 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 RAB17Q9H0T7 212 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 STMN4Q9H169 189 aaPredicted RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 TBC1D17Q9HA65 648 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 FANCEQ9HB96 536 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 CHMP1AQ9HD42 196 aaPredicted RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 MYNNQ9NPC7 610 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 RPRD1BQ9NQG5 326 aaKnown RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 FAM212BQ9NTI7 297 aaPredicted RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 SLC38A7Q9NVC3 462 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 SMPD3Q9NY59 655 aaPredicted RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 SPG21Q9NZD8 308 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 BAIAP2L1Q9UHR4 511 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 DBNLQ9UJU6 430 aaKnown RBP3.2□□□□□ -1.9
LEMD3-204ENST00000542032 MTUS1Q9ULD2 1270 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 GRID1Q9ULK0 1009 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 SNX7Q9UNH6 387 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 KCNK6Q9Y257 313 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 NUDCQ9Y266 331 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 N6AMT1Q9Y5N5 214 aa3.2□□□□□ -1.9
LEMD3-204ENST00000542032 A0A1B0GWJ7 208 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 TMEM221A6NGB7 291 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 FAM47DPA6NHR8 397 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 ERI2A8K979 691 aaKnown RBP3.19□□□□□ -1.9
LEMD3-204ENST00000542032 PLK4O00444 970 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 CLDN3O15551 220 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 E2F6O75461 281 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 CRCPO75575 148 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 MOCS3O95396 460 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 ACSL3O95573 720 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 CXCL14O95715 111 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 GH1P01241 217 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 GH2P01242 217 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 KRT6BP04259 564 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 KRT19P08727 400 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 ANKRD34CP0C6C1 535 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms