RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 C2orf81A6NN90 581 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 GPR89AB7ZAQ6 455 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 KCNN4O15554 427 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 PPFIA2O75334 1257 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 SLC25A14O95258 325 aaPredicted RBP5.25□□□□□ -1.57
CPSF7-220ENST00000541963 FTCDO95954 541 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 GAS8O95995 478 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 FGF1P05230 155 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 GPR89BP0CG08 455 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 SLC2A4P14672 509 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 GM2AP17900 193 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 STIP1P31948 543 aaKnown RBP5.25□□□□□ -1.57
CPSF7-220ENST00000541963 HMGCLP35914 325 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 GNPDA1P46926 289 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 MARCKSL1P49006 195 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 DCDC1P59894 354 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 PSG6Q00889 435 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 PDE1BQ01064 536 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 CFHR3Q02985 330 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 TLE3Q04726 772 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 WASHC5Q12768 1159 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 FOXI1Q12951 378 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 PARP6Q2NL67 630 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 ZXDCQ2QGD7 858 aaPredicted RBP5.25□□□□□ -1.57
CPSF7-220ENST00000541963 GALNTL6Q49A17 601 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 ANKRD20A2Q5SQ80 823 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 TPRG1LQ5T0D9 272 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 TSTD2Q5T7W7 516 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 HES3Q5TGS1 186 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 ANKRD20A1Q5TYW2 823 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 ANKRD20A3Q5VUR7 823 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 B4GALNT4Q76KP1 1039 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 CCDC91Q7Z6B0 441 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 GALNT13Q8IUC8 556 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 LSMEM2Q8N112 164 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 SLC25A41Q8N5S1 370 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 TRAM1L1Q8N609 369 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 AVL9Q8NBF6 648 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 NAXEQ8NCW5 288 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 IPMKQ8NFU5 416 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 SPATA22Q8NHS9 363 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 DTX3LQ8TDB6 740 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 BRSK1Q8TDC3 778 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 GLMPQ8WWB7 406 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 MAIP1Q8WWC4 291 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 OR1E3Q8WZA6 343 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 NPIPB3Q92617 1050 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 TADA1Q96BN2 335 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 NXPE2Q96DL1 559 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 HES6Q96HZ4 224 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 MAELQ96JY0 434 aaKnown RBP5.25□□□□□ -1.57
CPSF7-220ENST00000541963 TTC25Q96NG3 672 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 SNX18Q96RF0 628 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 TRIB3Q96RU7 358 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 ZSCAN5AQ9BUG6 496 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 SPATA16Q9BXB7 569 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 FRMD8Q9BZ67 464 aaPredicted RBP5.25□□□□□ -1.57
CPSF7-220ENST00000541963 CLPBQ9H078 707 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 GBA3Q9H227 469 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 TCEAL2Q9H3H9 227 aaPredicted RBP5.25□□□□□ -1.57
CPSF7-220ENST00000541963 STN1Q9H668 368 aaKnown RBP5.25□□□□□ -1.57
CPSF7-220ENST00000541963 KCNK9Q9NPC2 374 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 MRPL40Q9NQ50 206 aaKnown RBP5.25□□□□□ -1.57
CPSF7-220ENST00000541963 RASSF1Q9NS23 344 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 VPS18Q9P253 973 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 SLC17A6Q9P2U8 582 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 ZNHIT2Q9UHR6 403 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 RAB21Q9UL25 225 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 SUFUQ9UMX1 484 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 SLC17A4Q9Y2C5 497 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 PKP3Q9Y446 797 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF711Q9Y462 761 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 CABIN1Q9Y6J0 2220 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 DNAH14Q0VDD8 3507 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 CEP250Q9BV73 2442 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 LOC105369274A0A096LPK9 316 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 LOC102723532A0A0G2JNH3 316 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 FAM149AA5PLN7 773 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 C5orf60A6NFR6 353 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SAC3D1A6NKF1 404 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 OR5K4A6NMS3 321 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 INPP4BO15327 924 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 STX7O15400 261 aaKnown RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 ZSCAN12O43309 604 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 GRID2O43424 1007 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 NUDT21O43809 227 aaKnown RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 VEGFDO43915 354 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 KCNJ13O60928 360 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 FZD7O75084 574 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SLU7O95391 586 aaKnown RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SLC4A1P02730 911 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 ALDOAP04075 364 aaKnown RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 VCLP18206 1134 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 CASQ1P31415 396 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 GALNSP34059 522 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SPAM1P38567 509 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 ACTR1BP42025 376 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 POLD2P49005 469 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 LMAN1P49257 510 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 ACTR1AP61163 376 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms