RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-211	ENST00000541687	SPINT3	P49223	89 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	RHAG	Q02094	409 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	TUBA3C	Q13748	450 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	SMN1	Q16637	294 aa	Known RBP	13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	ZCCHC10	Q8TBK6	192 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	FOXJ1	Q92949	421 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	IRF7	Q92985	503 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	TMEM138	Q9NPI0	162 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	CREBZF	Q9NS37	354 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	GIN1	Q9NXP7	522 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	RNF6	Q9Y252	685 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	KLHL33	A6NCF5	533 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	OR7A17	O14581	309 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	ZW10	O43264	779 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	SSNA1	O43805	119 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	CH25H	O95992	272 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	RGS8	P57771	180 aa	Predicted RBP	13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	ST3GAL4	Q11206	333 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	NPRL3	Q12980	569 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	MTAP	Q13126	283 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	IL18R1	Q13478	541 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	ANKDD1A	Q495B1	522 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	LGALS12	Q96DT0	336 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	ALPK1	Q96QP1	1244 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687	RIMKLB	Q9ULI2	386 aa		13.98	□□□□□ -0.17
GCFC2-211	ENST00000541687		H7BY64	318 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	BCAS1	O75363	584 aa	Predicted RBP	13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	STS	P08842	583 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	JUP	P14923	745 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	CSF2RA	P15509	400 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	BMP7	P18075	431 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	TPRG1L	Q5T0D9	272 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	TMPRSS11A	Q6ZMR5	421 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	ARMCX6	Q7L4S7	300 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	ZNF583	Q96ND8	569 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	PRAP1	Q96NZ9	151 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	P2RY13	Q9BPV8	354 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	C5AR2	Q9P296	337 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	PCDH10	Q9P2E7	1040 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	CKMT1A	P12532	417 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	MATN1	P21941	496 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	AVPR1B	P47901	424 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	SEC13	P55735	322 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	NTHL1	P78549	312 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	ZNF763	Q0D2J5	394 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	FAM46C	Q5VWP2	391 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	CXorf57	Q6NSI4	855 aa	Known RBP	13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	DCP2	Q8IU60	420 aa	Known RBP	13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	SPART	Q8N0X7	666 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	RDH12	Q96NR8	316 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	HCFC1R1	Q9NWW0	138 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	GTF2E2	P29084	291 aa	Known RBP	13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	RCVRN	P35243	200 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	CRB2	Q5IJ48	1285 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	BHLHA9	Q7RTU4	235 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	PARG	Q86W56	976 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	COMMD2	Q86X83	199 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	OXR1	Q8N573	874 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	C7orf57	Q8NEG2	295 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	ABHD11	Q8NFV4	315 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	WFDC5	Q8TCV5	224 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	GLYATL1	Q969I3	302 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	ELAC1	Q9H777	363 aa	Known RBP	13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	MS4A12	Q9NXJ0	267 aa		13.97	□□□□□ -0.17
GCFC2-211	ENST00000541687	FAM240B	A0A1B0GVZ2	78 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	TMEM189-UBE2V1	I3L0A0	370 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	SEMA3D	O95025	777 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	OPRL1	P41146	370 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	GUCA1A	P43080	201 aa	Predicted RBP	13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	NCBP2	P52298	156 aa	Known RBP eCLIP	13.96	□□□□□ -0.17	3e-6	■□□□□ 9.3
GCFC2-211	ENST00000541687	SLC13A2	Q13183	592 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	CLCA4	Q14CN2	919 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	ZNF404	Q494X3	552 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	PLEKHS1	Q5SXH7	462 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	ZNF783	Q6ZMS7	281 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	NAGS	Q8N159	534 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	GEMIN6	Q8WXD5	167 aa	Known RBP	13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	WBP2	Q969T9	261 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	SLC35G5	Q96KT7	338 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	FAM129B	Q96TA1	746 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	HERC2P3	Q9BVR0	1158 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	HEBP1	Q9NRV9	189 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	LHX3	Q9UBR4	397 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	SPIN1	Q9Y657	262 aa	Predicted RBP	13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	FOCAD	Q5VW36	1801 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	TSPAN9	O75954	239 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	PFKL	P17858	780 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	RYK	P34925	604 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	CLCN7	P51798	805 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	RAB8A	P61006	207 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	TBPL1	P62380	186 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	IRF5	Q13568	498 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	EXOC3L2	Q2M3D2	409 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	CRTC2	Q53ET0	693 aa	Predicted RBP	13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	SBSN	Q6UWP8	590 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	RNF44	Q7L0R7	432 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	SLC5A11	Q8WWX8	675 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	PPP1R14A	Q96A00	147 aa		13.96	□□□□□ -0.17
GCFC2-211	ENST00000541687	KLF16	Q9BXK1	252 aa	Predicted RBP	13.96	□□□□□ -0.17

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