RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 MKKSQ9NPJ1 570 aaPredicted RBP17.84■□□□□ 0.45
VPS33A-205ENST00000541169 C14orf105Q9NVL8 296 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 TRPS1Q9UHF7 1281 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 IGF2RP11717 2491 aa17.84■□□□□ 0.45
VPS33A-205ENST00000541169 TPRP12270 2363 aaKnown RBP17.83■□□□□ 0.45
VPS33A-205ENST00000541169 IGLV3-12A0A075B6K2 115 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 BIRC5O15392 142 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 SPAG7O75391 227 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 NAGLUP54802 743 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 GALNT1Q10472 559 aaPredicted RBP17.83■□□□□ 0.44
VPS33A-205ENST00000541169 IFT88Q13099 833 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 TRAF3Q13114 568 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 PCLAFQ15004 111 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 CPSF6Q16630 551 aaKnown RBP eCLIP17.83■□□□□ 0.44
VPS33A-205ENST00000541169 ARHGAP40Q5TG30 622 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 FRG2Q64ET8 278 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 TTC19Q6DKK2 380 aaPredicted RBP17.83■□□□□ 0.44
VPS33A-205ENST00000541169 MRPL14Q6P1L8 145 aaKnown RBP17.83■□□□□ 0.44
VPS33A-205ENST00000541169 TRIM40Q6P9F5 258 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 FAM198BQ6UWH4 519 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 FRMD7Q6ZUT3 714 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 GPRIN3Q6ZVF9 776 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 CCNYL1Q8N7R7 359 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 OR2L5Q8NG80 312 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 OR52B6Q8NGF0 335 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 ZNF473Q8WTR7 871 aaKnown RBP17.83■□□□□ 0.44
VPS33A-205ENST00000541169 CCT6BQ92526 530 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 CATSPER2Q96P56 530 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 FRG2BQ96QU4 278 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 TGIF2Q9GZN2 237 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 REXO4Q9GZR2 422 aaKnown RBP17.83■□□□□ 0.44
VPS33A-205ENST00000541169 SYNPO2LQ9H987 977 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 EML4Q9HC35 981 aaKnown RBP17.83■□□□□ 0.44
VPS33A-205ENST00000541169 WDR70Q9NW82 654 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 NMRK1Q9NWW6 199 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 FREM2Q5SZK8 3169 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 SEC16AO15027 2179 aa17.83■□□□□ 0.44
VPS33A-205ENST00000541169 K7ENP7 123 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 FOXS1O43638 330 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 GALR3O60755 368 aaPredicted RBP17.82■□□□□ 0.44
VPS33A-205ENST00000541169 CREG1O75629 220 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 ESRRBO95718 433 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 IGHEP01854 428 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 KRT6AP02538 564 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 KRT6BP04259 564 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 PCNAP12004 261 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 KRT6CP48668 564 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 CDH13P55290 713 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 CYP4F2P78329 520 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 CUL3Q13618 768 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 RCN2Q14257 317 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 ZRSR2Q15696 482 aaKnown RBP17.82■□□□□ 0.44
VPS33A-205ENST00000541169 FAM199XQ6PEV8 388 aaPredicted RBP17.82■□□□□ 0.44
VPS33A-205ENST00000541169 INO80CQ6PI98 192 aaPredicted RBP17.82■□□□□ 0.44
VPS33A-205ENST00000541169 C10orf107Q8IVU9 208 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 OR4F6Q8NGB9 312 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 OR2Y1Q8NGV0 311 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 ADAMTS18Q8TE60 1221 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 UTP15Q8TED0 518 aaKnown RBP17.82■□□□□ 0.44
VPS33A-205ENST00000541169 TRPC4APQ8TEL6 797 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 STARD8Q92502 1023 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 MS4A6EQ96DS6 147 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 NSUN5Q96P11 429 aaKnown RBP17.82■□□□□ 0.44
VPS33A-205ENST00000541169 KCNC2Q96PR1 638 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 TBCDQ9BTW9 1192 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 NPLQ9BXD5 320 aaPredicted RBP17.82■□□□□ 0.44
VPS33A-205ENST00000541169 ACTL8Q9H568 366 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 ELOVL6Q9H5J4 265 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 PRM3Q9NNZ6 103 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 SLC17A7Q9P2U7 560 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 TCFL5Q9UL49 500 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 RNF11Q9Y3C5 154 aa17.82■□□□□ 0.44
VPS33A-205ENST00000541169 A0A0A6YYC8 382 aaPredicted RBP17.81■□□□□ 0.44
VPS33A-205ENST00000541169 I3L1I5 382 aaPredicted RBP17.81■□□□□ 0.44
VPS33A-205ENST00000541169 EFSO43281 561 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 NPHS1O60500 1241 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 CAPN1P07384 714 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 SMIM10L1P0DMW3 83 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 HSD3B1P14060 373 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 HSD3B2P26439 372 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 FOLR3P41439 243 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 ETV4P43268 484 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 HYAL2Q12891 473 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 SSPNQ14714 243 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 TOR1AIP1Q5JTV8 583 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 MLIPQ5VWP3 458 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 VASH2Q86V25 355 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 KIRREL3Q8IZU9 778 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 ENDOVQ8N8Q3 282 aaKnown RBP17.81■□□□□ 0.44
VPS33A-205ENST00000541169 C7orf57Q8NEG2 295 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 HUS1BQ8NHY5 278 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 WDR20Q8TBZ3 569 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 THAP4Q8WY91 577 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 TLCD1Q96CP7 247 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 MOCOSQ96EN8 888 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 SMIM10Q96HG1 83 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 OR1F2PQ96R84 312 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 SERPINI1Q99574 410 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 MS4A8Q9BY19 250 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 GSTO2Q9H4Y5 243 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms