RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SLC17A7Q9P2U7 560 aa13.5□□□□□ -0.25
LTBR-209ENST00000541102 C3orf18Q9UK00 162 aa13.5□□□□□ -0.25
LTBR-209ENST00000541102 MRPS2Q9Y399 296 aaKnown RBP13.5□□□□□ -0.25
LTBR-209ENST00000541102 PCDHGB7Q9Y5F8 929 aa13.5□□□□□ -0.25
LTBR-209ENST00000541102 HS3ST3B1Q9Y662 390 aa13.5□□□□□ -0.25
LTBR-209ENST00000541102 KCNE1BA0A087WTH5 132 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 SYCE1LA8MT33 242 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 A8MT66 165 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 G3V2L1 256 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 PRPF4O43172 522 aaKnown RBP eCLIP13.49□□□□□ -0.25
LTBR-209ENST00000541102 FOXS1O43638 330 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 LCMT2O60294 686 aaKnown RBP13.49□□□□□ -0.25
LTBR-209ENST00000541102 CCNT2O60583 730 aaKnown RBP13.49□□□□□ -0.25
LTBR-209ENST00000541102 PLIN3O60664 434 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 STK16O75716 305 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 SASH3O75995 380 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 S100BP04271 92 aaPredicted RBP13.49□□□□□ -0.25
LTBR-209ENST00000541102 GSTA1P08263 222 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 GFAPP14136 432 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 VARSP26640 1264 aaKnown RBP13.49□□□□□ -0.25
LTBR-209ENST00000541102 GRK3P35626 688 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 AVPR1BP47901 424 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 EMP2P54851 167 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 ALDH18A1P54886 795 aaKnown RBP13.49□□□□□ -0.25
LTBR-209ENST00000541102 FOXK1P85037 733 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 MAT1AQ00266 395 aaKnown RBP13.49□□□□□ -0.25
LTBR-209ENST00000541102 MYBPC3Q14896 1274 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 SYT16Q17RD7 645 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 VWA5B1Q5TIE3 1220 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 VN1R4Q7Z5H5 301 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 OR9A4Q8NGU2 314 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 NACC2Q96BF6 587 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 MVB12AQ96EY5 273 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 NSUN5Q96P11 429 aaKnown RBP13.49□□□□□ -0.25
LTBR-209ENST00000541102 SMAD5Q99717 465 aaKnown RBP13.49□□□□□ -0.25
LTBR-209ENST00000541102 DCDC2Q9UHG0 476 aa13.49□□□□□ -0.25
LTBR-209ENST00000541102 RP1L1Q8IWN7 2480 aaPredicted RBP13.49□□□□□ -0.25
LTBR-209ENST00000541102 BSNQ9UPA5 3926 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 FLNBO75369 2602 aaKnown RBP13.48□□□□□ -0.25
LTBR-209ENST00000541102 A0A1B0GTL3 188 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 CCDC189A1A4V9 331 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 COPEO14579 308 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 KLHL41O60662 606 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 GLRA3O75311 464 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 ALPPP05187 535 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 CD22P20273 847 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 EEF1DP29692 281 aaKnown RBP13.48□□□□□ -0.25
LTBR-209ENST00000541102 BCL6P41182 706 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 CCR8P51685 355 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 AIMP2Q13155 320 aaKnown RBP13.48□□□□□ -0.25
LTBR-209ENST00000541102 FAM53BQ14153 422 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 MPP2Q14168 576 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 TUBB8Q3ZCM7 444 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 IRAK1BP1Q5VVH5 260 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 FAAH2Q6GMR7 532 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 JMJD6Q6NYC1 403 aaPredicted RBP13.48□□□□□ -0.25
LTBR-209ENST00000541102 SLCO4C1Q6ZQN7 724 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 ASPGQ86U10 573 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 TCAIMQ8N3R3 496 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 ARHGEF39Q8N4T4 335 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 RBMXL3Q8N7X1 1067 aaKnown RBP13.48□□□□□ -0.25
LTBR-209ENST00000541102 AMER3Q8N944 861 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 SNX31Q8N9S9 440 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 CAMKVQ8NCB2 501 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 ABHD11Q8NFV4 315 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 OR11G2Q8NGC1 345 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 ZCCHC10Q8TBK6 192 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 SLC13A3Q8WWT9 602 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 SLC5A11Q8WWX8 675 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 ARL8AQ96BM9 186 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 C8orf44Q96CB5 159 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 THAP11Q96EK4 314 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 PGM2Q96G03 612 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 APOPT1Q96IL0 206 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 VPS50Q96JG6 964 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 ZNF552Q9H707 407 aaPredicted RBP13.48□□□□□ -0.25
LTBR-209ENST00000541102 TMBIM4Q9HC24 238 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 MKKSQ9NPJ1 570 aaPredicted RBP13.48□□□□□ -0.25
LTBR-209ENST00000541102 SLAMF7Q9NQ25 335 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 DNAJC11Q9NVH1 559 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 MKS1Q9NXB0 559 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 C5AR2Q9P296 337 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 PLLPQ9Y342 182 aa13.48□□□□□ -0.25
LTBR-209ENST00000541102 IGLV3-12A0A075B6K2 115 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 IDSB3KWA1 339 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 E2F3O00716 465 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 PPP6CO00743 305 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 OR1F1O43749 312 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 TYROBPO43914 113 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 SERPIND1P05546 499 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 HEXBP07686 556 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 ACPPP15309 386 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 TSPAN8P19075 237 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 CXCR2P25025 360 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 CDC16Q13042 620 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 PCBP2Q15366 365 aaKnown RBP eCLIP13.47□□□□□ -0.25
LTBR-209ENST00000541102 ADNP2Q6IQ32 1131 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 NXPE4Q6UWF7 544 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 PRSS41Q7RTY9 318 aa13.47□□□□□ -0.25
LTBR-209ENST00000541102 GOLGA7Q7Z5G4 137 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms